| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3943 |
|---|
| Symbol | |
|---|
| ID | 8546339 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 5437145 |
|---|
| End bp | 5438155 |
|---|
| Gene Length | 1011 bp |
|---|
| Protein Length | 336 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 77% |
|---|
| IMG OID | 646388615 |
|---|
| Product | Alcohol dehydrogenase GroES domain protein |
|---|
| Protein accession | YP_003268335 |
|---|
| Protein GI | 262197126 |
|---|
| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1063] Threonine dehydrogenase and related Zn-dependent dehydrogenases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0142481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.00944074 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGCTGGCCC TGTGGCTCGA AGACCGCGCG CTGCGGCTGC GCGATGACCT GCCGGTGCCC
GCGCCCGGCC CCGGCGAGGC GCGCGTGCGC GTGCTGCGCG CCGGCATCTG CGCCACGGAT
GTCGAGCTTG TGCGCGGCTA CTATCCGTTC ACCGGCGTGC CCGGCCACGA GTTCGTCGGC
GTGGTCGACG CGCTCGGCCC CGCGACCGAC GACGGTGCAG CGGACCCGGG CGACGACGAC
GACGACGACG GGGGCTGGCT TGGGCGCCGC GTGGTCGGCG AGATCAACGT GGTCTGCGGC
GCCTGCGCGC AGTGCCGGGC GGGCCGTCGC ACGCACTGCA CGCGCCGGCA AGCGCTCGGC
ATCCACGGCC GCCACGGCGC CTTCGCCGAG TACCTGTGCC TGCCGCTCGC CAACCTGCTC
GCGGTCCCCG ACGAGCTGAG CAGCGACGCG GCCGCGTTCA CCGAGCCGCT GGCGGCCGCG
CTCGAGCTCC AGGAGCAGGT CGCGCTGCGC CCCGGCGCGC GCGTGCTCGT GGTCGGCGCC
GGCAAGCTGG GCCAGCTCGT GGCCCAGAGT CTGGCGCTGA GCACGGCCCA GGTGCGCGTG
GTGTGCCGCT CGGCGCAGCG CCGCGCACCG CTCCACGCGC GCGGCATCGC CACCTGCGCG
CCCGACGAGG TCCGCGCCGG CTGCGCCGAC CTGGCCGTGG AGTGCAGCGG CCACCCCGAC
GGCTTCGCGC TGGCCCGGCG CGCGCTGCGG GCGCGCGGCA CCCTGGTGCT CAAGAGCACC
TACGCGGGCG CTCTGACCAT AGACGCCTCG TCGCTCGTGG TCGACGAGCT GACCGTGGTG
GGCTCGCGCT GCGGTCCCTT CGCGCCGGCC CTGCGCCTGC TCGCCAGCGG CCGCATCGAC
CCGATGCCGC TGGTGAGCGC GCGCTTCCCG CTGCGCGAGG CGCTGGCCGC CTTCGACGCG
GCGCGCGCGC CCGGCGCCTT CAAAGTCCTG CTGGCCGCCG ACGCCGCCTG A
|
|---|
| Protein sequence | MLALWLEDRA LRLRDDLPVP APGPGEARVR VLRAGICATD VELVRGYYPF TGVPGHEFVG
VVDALGPATD DGAADPGDDD DDDGGWLGRR VVGEINVVCG ACAQCRAGRR THCTRRQALG
IHGRHGAFAE YLCLPLANLL AVPDELSSDA AAFTEPLAAA LELQEQVALR PGARVLVVGA
GKLGQLVAQS LALSTAQVRV VCRSAQRRAP LHARGIATCA PDEVRAGCAD LAVECSGHPD
GFALARRALR ARGTLVLKST YAGALTIDAS SLVVDELTVV GSRCGPFAPA LRLLASGRID
PMPLVSARFP LREALAAFDA ARAPGAFKVL LAADAA
|
|---|
| |