| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3936 |
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| Symbol | |
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| ID | 8546332 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5430361 |
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| End bp | 5431086 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646388608 |
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| Product | pyrimidine utilization protein B |
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| Protein accession | YP_003268328 |
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| Protein GI | 262197119 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1335] Amidases related to nicotinamidase |
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| TIGRFAM ID | [TIGR03614] pyrimidine utilization protein B |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.259493 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.00944074 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGACAGGGA ACCTGAGCGG AGAGAACCCG GCCGAGTCCG TCAGCACGAC GCTCGCCGCC
CGGCCCGAGG ACATCGCGCT CGACGTCGCG CACACCGCGG TGGTGGTCAT CGACATGCAG
AACGCGTACG CGTCCCCGGG CGGCTACGTG GATCTGGCCG GCTTCGACAT CGCGGGCGCG
GCCGGCGTCA TCGGCCGCAT CGCCACGGTG CTGGAGTCGG CGCGCACAGC CGGGATGCAG
GTGGTGTTCT TGCAGAACGG CTGGGACCCC GACTACGTCG AGGCCGGCGG GCCGCAGTCG
CCCAACTGGC ACAAGTCCAA CGCGCTCAAG ACCATGCGCG CCCGCCCCGA GCTCGAGGGC
AAGCTGCTGG CGCGCGGCGG CTGGGATTAC GCGCTGGTGG ACGGCCTCAA GCCGCAGCCG
GGCGATATCC AGGTGCACAA GCCGCGCTAC AGCGCGTTCT TCCACTCGCA GCTCGACAGC
GTGCTGCGCG CGCGCGGCAT CCGCAACCTG GTGTTCGTCG GCATCGCGAC CAACGTGTGC
GTCGAGTCGA CGCTGCGCGA CGGCTTCCAC CTCGAATATT TCTGCGTCCT GCTCGAGGAC
GCGACCCATC ACCTGGGCCC GGAGTTCGTC CAGGCCGCCA CGGTGTACAA CGTCGAGAAG
TTCTTTGGCT GGGTGAGTAC GGTCGAGGAC TTCTGCGCCA GCATGCGAGC GATCGCCAAG
CCCTGA
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| Protein sequence | MTGNLSGENP AESVSTTLAA RPEDIALDVA HTAVVVIDMQ NAYASPGGYV DLAGFDIAGA
AGVIGRIATV LESARTAGMQ VVFLQNGWDP DYVEAGGPQS PNWHKSNALK TMRARPELEG
KLLARGGWDY ALVDGLKPQP GDIQVHKPRY SAFFHSQLDS VLRARGIRNL VFVGIATNVC
VESTLRDGFH LEYFCVLLED ATHHLGPEFV QAATVYNVEK FFGWVSTVED FCASMRAIAK
P
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