| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3924 |
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| Symbol | |
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| ID | 8546320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5409168 |
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| End bp | 5410157 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388596 |
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| Product | Porphobilinogen synthase |
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| Protein accession | YP_003268316 |
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| Protein GI | 262197107 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0113] Delta-aminolevulinic acid dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0861463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.218881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCT ATCCCCATAC CCGTATGCGG CGCAATCGCG CGAGCGACTG GAGCCGCCGC
CTGGTGCGCG AGAACGCGCT GAGCACCGAT GACCTCATCT GGCCGGTGTT CGTGTGCGAG
GGCGACAGCA CGCGCGAGCG CGTGGGCTCG ATGCCCGGCG TCGAGCGCCT GTCCATCGAT
CTCCTCACCG AGGCCGCGGC CGAGGCCAAG GAGCTCGGCA TCCCGGCGCT GGCGCTGTTC
CCGGTGACGC CTGCGGACAA GAAGACGCCC GACGGCGAAG AGGCCAAGAA CCCGGACAAC
CTGGTGTGCC GCGCGGTCCG CGCCGTCAAG CAGCAGGTGC CCGGCATCGG CATCATCTGC
GATGTCGCCC TCGACCCGTA CACGACCACG GGCCAGGACG GGCTGGTGCG CGACGGCTTC
GTGGTCAACG ACGAGACCGT CGAGGTGCTG TGCGAGCAGG CGGTGGTCCA GGCCCAGGCC
GGCTGCGACG TCATCGCGCC TTCGGACATG ATGGACGGCC GCATCGGCGC CATCCGCGAC
GCGCTCGACG CCGAGGATCT CGACCAGGTG CAGATCCTGG CCTACTCGGC CAAGTACGCG
TCGGCGTTCT ACGGTCCCTT CCGCGACGCG GTGGGCTCGA GCGGCGCGCT CGGCACCGGC
GACAAGCGCA CCTACCAGAT GGATCCGGCC AACGGCGACG AGGCCGAGCG CGAGGTCGCC
CAGGATCTGG AAGAGGGCGC CGATATGGTC ATGGTCAAGC CCGGCATGCC GTACCTCGAC
ATCGTGTTCC GGGTGAAACA CACCTTCTCG GTGCCGACCT TCGTGTACCA GGTGAGCGGC
GAGTACGCGA TGCTGCGCGG CGCGGCCGAG CAGGGCTGGC TCGACTGGGA CAAGGTGCTG
CTCGAGAGCC TGCTGGCCTT CAAGCGCGCG GGCGCCGACG CCGTGCTCAC CTACGGCGCG
CTCGACGCGG CCCGCCTGCT GCGGAGGTAG
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| Protein sequence | MSSYPHTRMR RNRASDWSRR LVRENALSTD DLIWPVFVCE GDSTRERVGS MPGVERLSID
LLTEAAAEAK ELGIPALALF PVTPADKKTP DGEEAKNPDN LVCRAVRAVK QQVPGIGIIC
DVALDPYTTT GQDGLVRDGF VVNDETVEVL CEQAVVQAQA GCDVIAPSDM MDGRIGAIRD
ALDAEDLDQV QILAYSAKYA SAFYGPFRDA VGSSGALGTG DKRTYQMDPA NGDEAEREVA
QDLEEGADMV MVKPGMPYLD IVFRVKHTFS VPTFVYQVSG EYAMLRGAAE QGWLDWDKVL
LESLLAFKRA GADAVLTYGA LDAARLLRR
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