| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3922 |
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| Symbol | |
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| ID | 8546318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5404885 |
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| End bp | 5405997 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646388594 |
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| Product | ribonuclease BN |
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| Protein accession | YP_003268314 |
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| Protein GI | 262197105 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1295] Predicted membrane protein |
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| TIGRFAM ID | [TIGR00765] YihY family protein (not ribonuclease BN) |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.644027 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.211181 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCACCATC GCAAGTACAA GGCGCGGCAG GGCTGGGAGA TCCTCAAGGG GACCTTCGAG
GAGTTCTCGA ACGACGAATG CCCGCGCCTG GCCGCGGCGC TGTCGTACTA CACGGTGTTC
GCGCTGCCGC CGCTGCTGGT GATTCTGATC ATCAGCGCCG GCCTGGTGCT GAGCCCGGCG
CAGGTGCAGT CGTGGATCGA CGGCCAGGTC GGCAGCCTGA TCGGCCCGGA GGTGGCCGAG
CAGATGCGGG TCATGGTCGA GCACGCGCGC TCCAAGGTCA GCCAGGACTT CTCCTTCGGG
CTGGTGCTGG CGGTCGGCGG TCTGCTGTTC GGCGCCAGCG GCGCGTTCGC GCAGCTTCAG
AAGGCGCTCA ACGCGACCTG GGGGGTCACG CCCGACCCCG AGGGCGGCGG TATCAAGAAC
TTCGTCGCCA AGCGCATCTT CTCGCTGGGC ATCATCCTGG CCATCGCCTT CTTCCTGCTG
GTCGCCCTGG TCATCAGCTC GCTCATCGCC GCGCTCAGCG ACCAGCTCGG TATGCTGCTG
CCGAGCGGGC TGTCGAGCGT GCTGCTGTGG GCGCTCGACA CCGGCATCAA CCTGGCCGTG
ATCACGCTGC TGTTCGGCTC GATGTTCAAG GTGATGCCCG ACGCGATCAT CGCCTGGCGC
GATGTCTGGG TCGGCGCGCT GGTCACGGCG GTGCTGTTCG TGGCCGGCAA GGCGCTGATC
TCGTTTTATA TCGGACGCAG CGACCTGGGC GAGATCTACG GCGCCACGGC CGCGCTCGCG
ATCCTGCTGG TGTGGATCTA CTACTCGAGC ATGATCCTGC TGATCGGGGC CGAGTTCACC
CAGGTGTGGT CGCAGCGCTT CGGCAAGGGC ATCCGCCCCG AGCCGGGCGC GGTGCGCATG
GACGAGATGG ACGGCGCGCC CGAAGGCGAG GACGAAGGCG AGGACGAGGG CGAGGGCGAG
GGTGCGGACG CCGACGACAC CGAGACCGCG CTGGCGGGCC AGGGCGAGGA CGGGGACGAG
GACGACGAGA GCGACGACGG CGACGGCGCG GGCGAACGAG CCGCGCGCGA CGCGCGCTCC
GCGCACCCGG CCCGGCGTCG GCCCGAGGCC TGA
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| Protein sequence | MHHRKYKARQ GWEILKGTFE EFSNDECPRL AAALSYYTVF ALPPLLVILI ISAGLVLSPA
QVQSWIDGQV GSLIGPEVAE QMRVMVEHAR SKVSQDFSFG LVLAVGGLLF GASGAFAQLQ
KALNATWGVT PDPEGGGIKN FVAKRIFSLG IILAIAFFLL VALVISSLIA ALSDQLGMLL
PSGLSSVLLW ALDTGINLAV ITLLFGSMFK VMPDAIIAWR DVWVGALVTA VLFVAGKALI
SFYIGRSDLG EIYGATAALA ILLVWIYYSS MILLIGAEFT QVWSQRFGKG IRPEPGAVRM
DEMDGAPEGE DEGEDEGEGE GADADDTETA LAGQGEDGDE DDESDDGDGA GERAARDARS
AHPARRRPEA
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