Gene Hoch_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3920 
Symbol 
ID8546316 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5403128 
End bp5403922 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content75% 
IMG OID646388592 
ProductABC transporter related protein 
Protein accessionYP_003268312 
Protein GI262197103 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1121] ABC-type Mn/Zn transport systems, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.197933 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCGGTG ACGCTGGCAC ATCCGAGTGG CTGCTGCGCT GCGAGCGGCT GCTCATCGGC 
TACGGCGGCC GCGCGCTGCT GCCGGCCTTC GACCTCAGCC TGCGCCCCGG CACCCTCACC
CTGGTGCTCG GCAAGAACGG CACCGGCAAG AGCACCTGGC TCAAAACCCT GCTCGGCCTG
CAGGCGCCGC TCGCCGGCCG GGTCGAGGTC GGCGCCCGGC GCCCGCGCAT GAGCTACATC
CCGCAGCGCG CCGACCTCGA CCCGCTGCTG CCGGTGCGCG CCGGCGCCGT GGTGTCCTGG
GGTCGCCTGC GCGGCTGGCG CTGCTTGCGG CCCTGGCCCG CGCGCCGCGA TCGCGCCGCC
TGCGCCGCCG CGCTCGAGCA GGCCGAGGCC CGCGCGCTCG CCCAGCAGCC CTTCCGCGAC
CTGTCCGGCG GCCAGCAGCA GCGCGTGCTC TTTGCCCGCT TGCTCGCCAG CGAAGCCGAG
CTGGCCCTGC TCGACGAGCC CACCGCCTCG CTCGACGTTC CCGGACAGGT GGCCGTCTAT
CAGCGCCTGG CCGCCCTGGC CCACGAGCGC GGCATGTGCA TCGTCGTCGT CACCCACACC
ATCGCCACCG CCGTGCGCTA CGCCGACCAG ATCATCTTCC TCGACCGCGA CACCCGCGCC
GGCGACGAGG CCAGCGCCAG CGCCGAGCCG GCCGAAGATG CGCTGATCAT CAGCGGCGCG
CCCGCCGAGA TCCTGGCTCA CCCCCGCTTC GTGCGCGTCT TCGGCGAGCA CAGCGCCGCC
CCGGAGGCGC CGTGA
 
Protein sequence
MPGDAGTSEW LLRCERLLIG YGGRALLPAF DLSLRPGTLT LVLGKNGTGK STWLKTLLGL 
QAPLAGRVEV GARRPRMSYI PQRADLDPLL PVRAGAVVSW GRLRGWRCLR PWPARRDRAA
CAAALEQAEA RALAQQPFRD LSGGQQQRVL FARLLASEAE LALLDEPTAS LDVPGQVAVY
QRLAALAHER GMCIVVVTHT IATAVRYADQ IIFLDRDTRA GDEASASAEP AEDALIISGA
PAEILAHPRF VRVFGEHSAA PEAP