Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3920 |
Symbol | |
ID | 8546316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 5403128 |
End bp | 5403922 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646388592 |
Product | ABC transporter related protein |
Protein accession | YP_003268312 |
Protein GI | 262197103 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.197933 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGGTG ACGCTGGCAC ATCCGAGTGG CTGCTGCGCT GCGAGCGGCT GCTCATCGGC TACGGCGGCC GCGCGCTGCT GCCGGCCTTC GACCTCAGCC TGCGCCCCGG CACCCTCACC CTGGTGCTCG GCAAGAACGG CACCGGCAAG AGCACCTGGC TCAAAACCCT GCTCGGCCTG CAGGCGCCGC TCGCCGGCCG GGTCGAGGTC GGCGCCCGGC GCCCGCGCAT GAGCTACATC CCGCAGCGCG CCGACCTCGA CCCGCTGCTG CCGGTGCGCG CCGGCGCCGT GGTGTCCTGG GGTCGCCTGC GCGGCTGGCG CTGCTTGCGG CCCTGGCCCG CGCGCCGCGA TCGCGCCGCC TGCGCCGCCG CGCTCGAGCA GGCCGAGGCC CGCGCGCTCG CCCAGCAGCC CTTCCGCGAC CTGTCCGGCG GCCAGCAGCA GCGCGTGCTC TTTGCCCGCT TGCTCGCCAG CGAAGCCGAG CTGGCCCTGC TCGACGAGCC CACCGCCTCG CTCGACGTTC CCGGACAGGT GGCCGTCTAT CAGCGCCTGG CCGCCCTGGC CCACGAGCGC GGCATGTGCA TCGTCGTCGT CACCCACACC ATCGCCACCG CCGTGCGCTA CGCCGACCAG ATCATCTTCC TCGACCGCGA CACCCGCGCC GGCGACGAGG CCAGCGCCAG CGCCGAGCCG GCCGAAGATG CGCTGATCAT CAGCGGCGCG CCCGCCGAGA TCCTGGCTCA CCCCCGCTTC GTGCGCGTCT TCGGCGAGCA CAGCGCCGCC CCGGAGGCGC CGTGA
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Protein sequence | MPGDAGTSEW LLRCERLLIG YGGRALLPAF DLSLRPGTLT LVLGKNGTGK STWLKTLLGL QAPLAGRVEV GARRPRMSYI PQRADLDPLL PVRAGAVVSW GRLRGWRCLR PWPARRDRAA CAAALEQAEA RALAQQPFRD LSGGQQQRVL FARLLASEAE LALLDEPTAS LDVPGQVAVY QRLAALAHER GMCIVVVTHT IATAVRYADQ IIFLDRDTRA GDEASASAEP AEDALIISGA PAEILAHPRF VRVFGEHSAA PEAP
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