Gene Hoch_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3916 
Symbol 
ID8546312 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5399190 
End bp5400590 
Gene Length1401 bp 
Protein Length466 aa 
Translation table11 
GC content71% 
IMG OID646388588 
Producthypothetical protein 
Protein accessionYP_003268308 
Protein GI262197099 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0184862 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0893637 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTTCCC CTTCCTCTAC CATCTCCGCC ATCGCCCTGT TGCTCGGCCC GCTGCTGGTA 
TCCGCAGCCG CGCCGGCCTG GGCACAAAGC GTCGCGCCCG CCGCCGACGA CAGCGCGTCC
GAAAAACCAG CCCCCACCCC GCAAGCTCCT GCCGACGGGC CCGCCAGCGA CGAGCCCGCC
AGCGAGCCAG ACAACCAAAA CGACGACGCG CCAGACGCGC TCAGCGCGGC CGAGCTGGCC
GAGCTCGAGG CCGAACTCGG CGCCACGCTC GACGCCGACG CCGCCGAGCT GGCCGACGCG
CGACCCAGCG CGCCCGCGAG CAGCAACCCC GTGGCCGCCG CCGCCGGCGC CATCGACCTC
GACCTGGCCT TCATCGCCGA CGTCGCCCTG GCCTACTTCA GCACCGAGGA GCCGCTGCAG
GTCGGCGGCC ACGATCCCAA CCAGACCGGC TTCACCCTGC AGCAGCTCGA GCTGGCCATC
GCCAGCGCCG TCGACCCCTA CTTCCGCGTC GACGGCAACA TCGTGTTCTC GCTCTTCGGC
GTCGAGATCG AGGAGATCTA CGCCACCACC ACCGCCCTGC CCGGCAGCCT GCAGGTGCGC
GTCGGCCAGT TCCTCACCCG CTTCGGCCGC ATCAACCCCA CTCACCCGCA CACCTGGAAC
TTCGTCGACC AGACCCTGGC CATCGGCCGC GTCTTCGGCG GCGAGGGCAA CCGCGGCTTG
GGCGTCGAGC TGTCCTATCT CACGCCGCTG CCCTGGTACG TCGAGCTCAT CGCCTCCACC
ACCGACGCCC GCGGCGCCGC CACCGCGCGC AGCTTCTTCG GCGCCGACGC CCAGCCCGTG
CGCACCGCGC TCGACTTCCA GCACACCCTG GCCATCAAGC AGTTCTTCCC GCTCAACCAC
GACTGGTCGC TGCTCTGGGG CCTGAGCCTG GCCGGCGGCC CCAACGCCAC CGGTCACGAC
AACCGCAGCG ACGTCTACGG CACCGACCTG TTCCTCAAGT ACCGGCCCAT CACCGGCCAG
GGCCAGGGCG ACATGGCCGT CGAGCTGCAA GCCGAGTGGC TGTATCGCCG CCGCCAGGTG
CCGCGCAACC TGCTCGACGA CCACACCGGC TACGCCCACC TGCTGTGGCG CATGAACAAG
CGCTGGAGCA CCGGCCTGCG CTACGAGATC GGACTGCCGT CCAGGAACCG CCGCGGGGAA
GTCGGCGACG ACGACCTCAA CCCCGAATGG ACTGCCACCC GGCAGCGTCT CAGCGGCAGC
TTCACCTACC ACCCCACCGA GTTCTCGCGC CTGCGCGCGC AGGCCTCGGT CGACGCCCCC
GGCTGGCTCG AGCAGCCCAT CTACGCCCTG ATGCTCGCCT GCGAGTTCAG CATCGGCGCC
CACGGCGCCC ACGCCTTCTG A
 
Protein sequence
MRSPSSTISA IALLLGPLLV SAAAPAWAQS VAPAADDSAS EKPAPTPQAP ADGPASDEPA 
SEPDNQNDDA PDALSAAELA ELEAELGATL DADAAELADA RPSAPASSNP VAAAAGAIDL
DLAFIADVAL AYFSTEEPLQ VGGHDPNQTG FTLQQLELAI ASAVDPYFRV DGNIVFSLFG
VEIEEIYATT TALPGSLQVR VGQFLTRFGR INPTHPHTWN FVDQTLAIGR VFGGEGNRGL
GVELSYLTPL PWYVELIAST TDARGAATAR SFFGADAQPV RTALDFQHTL AIKQFFPLNH
DWSLLWGLSL AGGPNATGHD NRSDVYGTDL FLKYRPITGQ GQGDMAVELQ AEWLYRRRQV
PRNLLDDHTG YAHLLWRMNK RWSTGLRYEI GLPSRNRRGE VGDDDLNPEW TATRQRLSGS
FTYHPTEFSR LRAQASVDAP GWLEQPIYAL MLACEFSIGA HGAHAF