| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3911 |
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| Symbol | |
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| ID | 8546307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5394771 |
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| End bp | 5395520 |
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| Gene Length | 750 bp |
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| Protein Length | 249 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 646388583 |
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| Product | protein of unknown function DUF28 |
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| Protein accession | YP_003268303 |
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| Protein GI | 262197094 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0217] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR01033] DNA-binding regulatory protein, YebC/PmpR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.662224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0433199 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCAGGTC ACAGCAAATG GTCCACGATC AAGCGCAAGA AGGCGGCCGT CGACGCCAAG
CGCTCCAAGA TCTGGACGAA GATTCTCAAA GAAGTCCAGG TCGCCGCGCG CATGGGCGGT
GCCGATCCCG ATGGCAACGC GCGCCTGCGC ATGGCCGTGG ATAAAGCCCG CGGCGCCAAC
GTCCCCAAGG ACACGCTGCA GCGCGCCATC GACAAGGGCT CGGGCGCGGG CGCGGGCGAT
GACTGGGAAG AGGTGGTGTA CGAGGGCTAC GGCCCCGCGG GCGTGGCCGT GGTGCTCGAG
TGCATGACCG ACAACCGCAA CCGCACGGTG AGCGAGATCC GCCACTCGCT CGAGAAGTTC
GGCGGCAACA TGGGCACCAC CGGCTCGGTG TCGTGGATGT TCAACAAGCG CGGCATCATC
CACGTGCTCA AGGACGCGAC CAGCGAGGAC AAGCTGATGG AGGTCGCGCT CGAGGCCGGC
GCCGAGGACG TGCGCGACGA CGAAGAGGTG TGGACGGTGG ACACCGAGCC GAGCAACTTC
ATCGGCGTGC AGGACGCGCT GCGCGAGGCC GGGATCGAGG TGGAGAACGC CGAGATCGAC
AACATCCCGG ACAACCGCAT CGAGGTGCCC GAGGACAAGG CCGAGAGCCT GGTGAAGATG
CTGGGCACGC TCGAGGACCT CGACGACGTG CAGAACGTCT ACGCCAACTA CGATATGTCC
GACGAGCTGT ACGAGCGCTA CAGCTCGTGA
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| Protein sequence | MSGHSKWSTI KRKKAAVDAK RSKIWTKILK EVQVAARMGG ADPDGNARLR MAVDKARGAN
VPKDTLQRAI DKGSGAGAGD DWEEVVYEGY GPAGVAVVLE CMTDNRNRTV SEIRHSLEKF
GGNMGTTGSV SWMFNKRGII HVLKDATSED KLMEVALEAG AEDVRDDEEV WTVDTEPSNF
IGVQDALREA GIEVENAEID NIPDNRIEVP EDKAESLVKM LGTLEDLDDV QNVYANYDMS
DELYERYSS
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