Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3905 |
Symbol | |
ID | 8546301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5387902 |
End bp | 5388681 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 79% |
IMG OID | 646388577 |
Product | Thrombospondin type 3 repeat protein |
Protein accession | YP_003268297 |
Protein GI | 262197088 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.161209 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCGGT CGCTCGTGCC CGGCGCGCTG TCGCTGGCGC TGCTGCTGGC GCTCGGCTGG CTGCTGCTGC ACCCGCACCC GCGGCTCCCC GAGCGTCCCG CCCCGGACCT CGACGGCGAC GGCGTGGCCG ACGCGCTCGA CGCGTGCGCG CGCGAGGCCG GCCTCTTGCC CGACGGCTGC CCGCCGCGCG ACAGCGACGG CGATGGCGCG CTCGACCGCG ATGACGAGTG CCCGGAGCGC CCCGGACCGC CGGGCAACCG CGGCTGTCCC GACCGCGACG GCGACGGCGA CGGCGTGGTC GATCGCGGCG ACCGCTGCCC GGCGCAGGCC GGCCATCCCG AGGCCGAGGG CTGCGCGCCC GCCGACAGCG ATGAGGACGG TTTCTGGGAC GCCGAGGACG CGTGCCCCGA GCAGGCCGAG GTGTGGAACG GGCGCGACGA TGTCGACGGC TGCCCCGACC CCGGCGCCGC GCGGCTCGAG GTCGCGGCCG GCCGCATCGC GCCCGCGGGG CCGGCCTGGT TTTCGCGCAG CGGGCGGCTC ACGCGCGCCG GCCGCGTCGG CTTGCAGCGC GCCGCGGCCG TGCTCCACGC GGCCCGCGCC CGCCGGGTGC GCGTGCAGGT GGCGATGCCG GGCTCGGGCT CGGGGACCGC GCCGCAGCGC CGGGCCGAGC GCGAGGCCGC AGCCGCGATC GCGGTGTTGG CGCATGAGCG GCCGGGCCTG GCCCTCGAGC GCGAAGATCT CAGCGGCGAG GGCGCCGGGT TCGCGCTCGC CTTTGAATGA
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Protein sequence | MLRSLVPGAL SLALLLALGW LLLHPHPRLP ERPAPDLDGD GVADALDACA REAGLLPDGC PPRDSDGDGA LDRDDECPER PGPPGNRGCP DRDGDGDGVV DRGDRCPAQA GHPEAEGCAP ADSDEDGFWD AEDACPEQAE VWNGRDDVDG CPDPGAARLE VAAGRIAPAG PAWFSRSGRL TRAGRVGLQR AAAVLHAARA RRVRVQVAMP GSGSGTAPQR RAEREAAAAI AVLAHERPGL ALEREDLSGE GAGFALAFE
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