| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3889 |
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| Symbol | |
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| ID | 8546285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5358550 |
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| End bp | 5360511 |
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| Gene Length | 1962 bp |
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| Protein Length | 653 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 646388561 |
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| Product | acetoacetyl-CoA synthase |
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| Protein accession | YP_003268281 |
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| Protein GI | 262197072 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
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| TIGRFAM ID | [TIGR01217] acetoacetyl-CoA synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00052085 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGAG CTCTGTGGAC ACCTTCGCGC GAGCGAATCG CGCACAGCCG GCTGCGGGCA
TTTCAGCAGC AGCTCGACGA GCCGAGCCTG GCGACTTGCG ATTACGCGAC CCTGCACGCC
TGGTCGGTCG CCGAGATGGA GCGCTTCTGG GAGGCGCTGT GGTCGTTCTG CGGCGTCGTC
GGCGAGCGCG GCGCGGGCCC GGCCGTGGTC CTGGGCGACG GCATGCGGGC GGCGCGCTTC
TTCCCCGAGG CGCGTCTCAA CTACGCCGAG AACCTGCTGC GCCGCCGCGA CGACGCCGAC
GCGATCGTCT TCCGCAGCGA GACCGGCGCG ATCCGGCGGG TGAGCTACGC GGCGCTGTAC
CAGCGGGTCT CGCGGGTGGT GGCCGCGCTG CGCGCCGACG GGGTGGGGCC GGGCGACCGC
GTCATCGGGT TTCTGCCCAA CCTGCCCGAG ACCGTGATCG CGATGCTGGC GACCACGGCG
TTGGGCGCGG TGTGGTCGTC GTGTTCGCCC GACTTCGGGG TTCAGGGCGT GCTCGATCGC
TTCGGTCAGA TCGCGCCCAA GGTGCTGTTC TGCGCCGACG GCTACTTCTA CAGCGGCAAG
ACCCTGTCCT CGCTCGAGCG CGTGGCCGCC TTCGCCAAGC AGCTGCCCAC GCTCGAGCGC
GTGGTCGTGT GTCCCTACGT AGCCGAGCAG CCGGCGCTCG ACGCGCTCGC GGGGCTGCCC
GCGGCGGTGC GCCTCGACGA GTACGTGGAC GGGCATCCCG CTGGCGAGAT CGCGTTCGAG
CGGCTGCCCT TTGCCAGCCC GCTGTACGTG ATGTTCTCCT CGGGCACCAC GGGCAAGCCC
AAGTGCATCG TCCACGGCGT CGGCGGCACG CTCTTGCAGC ACCTCAAAGA GCACCAGCTC
AACTGCGACA TTCGCCGCGA TGATCGCGTC TTCTACTTCA CCACCTGCGG CTGGATGATG
TGGAACTGGC TGGTGAGCGC GCTGGCCTCC GAGGCCACGC TGCTGCTGTT CGACGGCGCG
CCCTTTCATC CCAGCGGCGA GGTGCTCTTC GACTTCATCG AGGCCGAGCG CGGCACGCTC
TTCGGCACCT CGGCCAAGTT CATCGACGCG CTCGCGGGCG CCGGGCTGTC GCCGGGCAAG
AGCCACGATC TCTCGAGCGT CCGCACCCTG ACCTCGACGG GTTCGCCGCT GCTGCCCGAG
GGCTTCGACT ACGTGTACGA ACACATCTCG GCCGATCTCA GCCTGGCGTC GATATCGGGC
GGCACCGATA TCCTGGGCTG CTTTGTCGGC GGCAATCCGC TGTCGCCGGT GTGGCGCGGC
GAGATCCAGG GGCCGATGCT GGGCATGGCG GTGGCCGTGT ACGACGAAGC CGGCGCGCCC
GTGCGCGAGC AAAAGGGCGA GCTGGTGTGC ACCCGGCCGT TTCCCTCCAT GCCCCTGGGC
TTCTGGGACG ATCCTGACGA CGCGCGCTAC AGCGCGGCCT ATTTCGAGCG CTTCCCGGGC
ATCTGGTGCC ACGGCGACTT CGCCGAGATC ACCGAGCACG GCGGCGCCAT CATCTACGGT
CGCTCGGACG CCACGCTCAA CCCGGGCGGC GTGCGCATCG GCACCGCCGA AATTTACCGC
CAGGTCGAGA CCCTGCCCGA GGTCGCCGAG GCGATCGTCA TCGGCCAGAG CTGGAAGGGC
GACGTGCGCG TGGTCCTGTT CGTCAAGCTG GCGCCGGGCG CCGTGCTCGA CGACGCGCTC
ATCACGACCA TCAAGCGGCG CATCCGCGAG GGCGCGAGCC CGCGGCACGT GCCCGCCAAG
GTGCTCGAGG TCGCCGACAT CCCGCGCACC AAGTCGGGCA AGATCGTCGA GCTGGCCGTT
CGCGAGGTAG TTCATGGACG GCCGGTCAAA AACCAGTCGG CCCTGGCCAA CCCCCAGGCG
CTCGAGGGAT TCGCCGAGCG CGCCGAGCTG GCCGAGGACT GA
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| Protein sequence | MNRALWTPSR ERIAHSRLRA FQQQLDEPSL ATCDYATLHA WSVAEMERFW EALWSFCGVV
GERGAGPAVV LGDGMRAARF FPEARLNYAE NLLRRRDDAD AIVFRSETGA IRRVSYAALY
QRVSRVVAAL RADGVGPGDR VIGFLPNLPE TVIAMLATTA LGAVWSSCSP DFGVQGVLDR
FGQIAPKVLF CADGYFYSGK TLSSLERVAA FAKQLPTLER VVVCPYVAEQ PALDALAGLP
AAVRLDEYVD GHPAGEIAFE RLPFASPLYV MFSSGTTGKP KCIVHGVGGT LLQHLKEHQL
NCDIRRDDRV FYFTTCGWMM WNWLVSALAS EATLLLFDGA PFHPSGEVLF DFIEAERGTL
FGTSAKFIDA LAGAGLSPGK SHDLSSVRTL TSTGSPLLPE GFDYVYEHIS ADLSLASISG
GTDILGCFVG GNPLSPVWRG EIQGPMLGMA VAVYDEAGAP VREQKGELVC TRPFPSMPLG
FWDDPDDARY SAAYFERFPG IWCHGDFAEI TEHGGAIIYG RSDATLNPGG VRIGTAEIYR
QVETLPEVAE AIVIGQSWKG DVRVVLFVKL APGAVLDDAL ITTIKRRIRE GASPRHVPAK
VLEVADIPRT KSGKIVELAV REVVHGRPVK NQSALANPQA LEGFAERAEL AED
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