| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3886 |
|---|
| Symbol | |
|---|
| ID | 8546282 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 5353031 |
|---|
| End bp | 5353957 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 646388558 |
|---|
| Product | glutaredoxin-like protein |
|---|
| Protein accession | YP_003268278 |
|---|
| Protein GI | 262197069 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0278] Glutaredoxin-related protein |
|---|
| TIGRFAM ID | [TIGR00049] Iron-sulfur cluster assembly accessory protein
[TIGR00365] monothiol glutaredoxin, Grx4 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTCTCG ATCAGGGCTT GAAGCAGCGA ATCGAATCGA TCATCGCCTC GGACCAGGTA
GTGCTGTTCA TGAAGGGAAA CCGCAGTTTC CCTCAGTGCG GCTTCTCCTC GACCGTGGTG
CAAATCCTCA ACTCCATGGT CCCGAACTAC ACGACCGTCA ATGTACTCGC GGATCCCGAA
GTCCGCCAGG GTATCAAGGA GTTCTCGGAC TGGCCGACCA TCCCCCAGCT CTACGTCGAG
GGTGAGTTCG TCGGCGGCTG CGACATCGTC CGCGAGATGT TCGAAAATGG CGAGCTGGCG
CGTCTGCTCG GCAGCCAGGA GGTGGAGGCG CCGACCATCA CCATCACCGA CGCCGCCGCC
GCCGCGCTCA AGTCGGCGCT GTCGGCCGAG GGCGGCGAAG GCGACGTCAT CCACCTGGCG
GTGGACGCGC GCTTTCAGCA CAACCTCGAC CTCGGCCCCA AGACCGAGCA CGGCATCGAG
GTCGCATCCA ACGGCGTGCT GCTCGAGGTC AACCGCATGA GCGCGCGCCT CGCCGACGGC
CTCACCATCG ACTTCGTCGA GGAGGGCCTG CAGCGCGGCT TCAGGATGGA TAACCCCAAC
CGTCCGCCCG AGGTCGTCGA GCTGAGCCCG GCCGAGCTCA AGGCCAAACT CGACGCCGGC
GAGATCAAAG AGCTGATCGA CGTGCGCTCG CCCGAGGAGC GCAAGACCGC CCAGATCGCC
GACTCGCGGC TGCTCGACGA CGCCACCATG CAGCAGCTCA CGCAGCTCGA TGTCGACACC
CCGCTGGCCT TCTACTGCCA CCGCGGACAG CGCAGCAAGG CCGCGGCCGA GCACTTCCGC
GATCGCGGCT TCCGCAAGGT CTACAACCTG AGCGGCGGCA TCGACGCCTG GTCGACCGAG
GTCGACAGCG ACGTCCCCCG CTACTGA
|
|---|
| Protein sequence | MSLDQGLKQR IESIIASDQV VLFMKGNRSF PQCGFSSTVV QILNSMVPNY TTVNVLADPE
VRQGIKEFSD WPTIPQLYVE GEFVGGCDIV REMFENGELA RLLGSQEVEA PTITITDAAA
AALKSALSAE GGEGDVIHLA VDARFQHNLD LGPKTEHGIE VASNGVLLEV NRMSARLADG
LTIDFVEEGL QRGFRMDNPN RPPEVVELSP AELKAKLDAG EIKELIDVRS PEERKTAQIA
DSRLLDDATM QQLTQLDVDT PLAFYCHRGQ RSKAAAEHFR DRGFRKVYNL SGGIDAWSTE
VDSDVPRY
|
|---|
| |