| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3857 |
|---|
| Symbol | |
|---|
| ID | 8546250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 5309318 |
|---|
| End bp | 5310208 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646388526 |
|---|
| Product | Nitrilase/cyanide hydratase and apolipoprotein N- acyltransferase |
|---|
| Protein accession | YP_003268249 |
|---|
| Protein GI | 262197040 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0388] Predicted amidohydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.236564 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0770762 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGACG CCGCCCCCGA CCGACGTTTT CGTCTCGCTG CGCTACAGAT GTGTGCCGGC
GACGACCGCG ACAAGAACCT CGAGCTGTGC GACCGCCAGG TGGCCGCTGC GGCCTCTGCC
GGCGCCGAGA TGGTGGTTCT GCCCGAGAAC TTCGCCTACC TCGGCCACAG CGAAGGCGAT
CGCATGGCGG CCGCCGAGCT GCTCGACGAA CGCGAGCCCG GCCCCATCCT GGCCGCGCTC
AAACGCATGG CCACGGTGCA CGGCGTGTGG CTGGTCGGCG GCGGCATGGC CGAGCGCATC
CCCGAGCGCG AGGTCAAAGA CGGGATCGAC CCCGACAAGC AGGCCTTCAA CACCTGCGTG
GTCGTGGCCC CGGGCGGCGC GCTGGTGAGC CGCTACCGCA AGATCCACCT GTTCGACGCC
GACATCCCCG ACGGCCCCTC GCTGCGCGAG TCGAGCGGCA CCGTCGCCGG CCACGAGATC
GGCGTGTGCG AGACCCCGCT GGCGCGGCTC GGCCTCACGG TCTGCTACGA CCTGCGCTTT
CCCGAGATCT ACCGCGCGCT GTGCGTGCAC GAGGGCGCCG AGCTCGTGGT CGTGCCCTCG
GCCTTCACCG CGCGCACCGG CGCCGCGCAC TGGCACGTGC TGCTGCGCGC GCGCGCCATC
GAGAACCAGT GCTTCATCGT CGCCGCGGCC CAGGTCGGCC AGCACAACGA GCGCCGCAAC
TCCTACGGCC ACGCGCTCAT CGTCGATCCC TGGGGCACCA TCCTGGCCGA GGTCGAGGAC
GGCGAGGGCC TGGCCATCGC CGACATCGAT CTCGCGCTCA TCGAGCAGAC CCGGCAGCGC
ATGCCCTGCC ACCAGCACGC GGTGCTGCTG CCGCCCGAGC GGCCGGCGTG A
|
|---|
| Protein sequence | MSDAAPDRRF RLAALQMCAG DDRDKNLELC DRQVAAAASA GAEMVVLPEN FAYLGHSEGD
RMAAAELLDE REPGPILAAL KRMATVHGVW LVGGGMAERI PEREVKDGID PDKQAFNTCV
VVAPGGALVS RYRKIHLFDA DIPDGPSLRE SSGTVAGHEI GVCETPLARL GLTVCYDLRF
PEIYRALCVH EGAELVVVPS AFTARTGAAH WHVLLRARAI ENQCFIVAAA QVGQHNERRN
SYGHALIVDP WGTILAEVED GEGLAIADID LALIEQTRQR MPCHQHAVLL PPERPA
|
|---|
| |