| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3856 |
|---|
| Symbol | |
|---|
| ID | 8546249 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 5308578 |
|---|
| End bp | 5309207 |
|---|
| Gene Length | 630 bp |
|---|
| Protein Length | 209 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 646388525 |
|---|
| Product | protein of unknown function DUF150 |
|---|
| Protein accession | YP_003268248 |
|---|
| Protein GI | 262197039 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG0779] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.113765 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.0726856 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTACGTC TGCCCCCACA TTTGCTTGGC TACGAGGAGA GGTGGGCGCG GGCCCACCTT
TTTTTTACGC GAGGGATGAG AGCGAACGAT TCGATGACAG AGCAGCTCAT GCGCATTGCC
GAACCGGTGT GCGCAAGCGC CGGCTACGAG CTCGTGGATC TGTCGCTGAC CCAATCACGC
GTGGGGTGGC TCGTCCAGGT GTTCATTGAT CATATGCACT CGGACGAGAC CTCGACAGTT
GCGGGCGGCG AAGAAGCCAG CGAGGTGAGC CTCGAGGACT GCGAGCACGT GAGTCGCGAG
CTGAGTGCGG TACTCGACGT CGAGGATCCG CTGCCATTTG CCTACAATCT CGAGGTGTCG
TCGCCCGGTC TCGATCGGCC GCTGCGCACG GTCGCGCACT TCCAGCGCTT TGCCGGACAC
GAGGTCAAGG TCCGCCTGGA CGGCACCGGC GACGCCACCG GCCGGCGCAA CTTCAAGGGC
CGCCTGGAGG CGGTGTCGGC GGAGGCGCCG GCATCCATCG TCGTAAACGT CGATGGCGCG
CCCCACACCC TGCTGATTGA TGATATCGAG AGCGCCCGCG TGGTTCCCGA CTGGAACGCC
ATCATGCACC GAGGTGGAAC CAAGCGCTGA
|
|---|
| Protein sequence | MVRLPPHLLG YEERWARAHL FFTRGMRAND SMTEQLMRIA EPVCASAGYE LVDLSLTQSR
VGWLVQVFID HMHSDETSTV AGGEEASEVS LEDCEHVSRE LSAVLDVEDP LPFAYNLEVS
SPGLDRPLRT VAHFQRFAGH EVKVRLDGTG DATGRRNFKG RLEAVSAEAP ASIVVNVDGA
PHTLLIDDIE SARVVPDWNA IMHRGGTKR
|
|---|
| |