Gene Hoch_3852 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3852 
Symbol 
ID8546245 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5302449 
End bp5302913 
Gene Length465 bp 
Protein Length154 aa 
Translation table11 
GC content68% 
IMG OID646388521 
Productprotein of unknown function DUF503 
Protein accessionYP_003268244 
Protein GI262197035 
COG category[S] Function unknown 
COG ID[COG1550] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.411613 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.183613 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTCGTCG GTGTCTGCCG CCTGACGCTG TTGGCCCCGC AGTGTCATTC GCTCAAGGAG 
AAGCGTTCGG TGTTGCGCAA GATCAAAGAT CGGACGCGCG GACGCTTTCA CCTGGGGCTC
ACCGAGGTCG CTGCCCAGGA CACCTGGCAG CGCCTGGTGC TGGGATTTTC CATCACTGGA
TGTGAGCGCG ACCGCGTCGA GCAGCGTCTC GACGAGGTCG TGCGCTTTAT CGAGCGCATG
GGTCTGGCCT CGACCGCCGA GGACGAGCGC GAGCTGGTGC ACTTCGGGCC CGAGCGCTTC
GGCGCCGAGC GCTTCGGCGC CGGGCCGGCG CATGCCGAGG CGGGCGCGGC GGACGAGTGG
ATGCCCGAGA GCTGGCAACA GGCTCTGCGT GCGTCCGAGG ACGAGAGGTC CGCGGACGCG
TCCGAGATGT CCGCAGACGC GTCCGAGGAC GAGGGAGACG ACTAG
 
Protein sequence
MFVGVCRLTL LAPQCHSLKE KRSVLRKIKD RTRGRFHLGL TEVAAQDTWQ RLVLGFSITG 
CERDRVEQRL DEVVRFIERM GLASTAEDER ELVHFGPERF GAERFGAGPA HAEAGAADEW
MPESWQQALR ASEDERSADA SEMSADASED EGDD