| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3847 |
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| Symbol | |
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| ID | 8546240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5296453 |
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| End bp | 5298588 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 646388516 |
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| Product | polyribonucleotide nucleotidyltransferase |
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| Protein accession | YP_003268239 |
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| Protein GI | 262197030 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
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| TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.147568 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.116098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTTTG TCCGCGAATC CGTCACCGTG GGCGACAAGG AGATCATCAT CGAGACCGGA
AAATGGGCCA AGCAGGCCTC CGGCTCGGTG GTCGTCCGCT GCGGGGACAC GATGGTGCTG
GTCACGGCCA CCGCATCGAA GTCGCCGCGC GTGGGCATGG ATTTCCTGCC CCTCACCTGC
GAGTACCAGG AGAAGACCTA CTCGGCCGGT AAGATCCCGG GTAACTTCTT CCGCCGCGAA
GCCCGGCCCT CGACCGACGA GGTGCTGGTC GCCCGGCTCA TGGACCGGCC CTCGCGGCCG
CTGTTCCCCA AGCTGTGGCG CTGCGAGACC CAGCTCATCG CCAACGTGGT GAGCTTCGAC
CAGTCCAACG CCGCCGACGT GCTGGCCATG ACCGGCTCCT CGTGCGCGCT GCACATCTCG
GACATCCCCT GGGATGGCCC GGTGGCCGCG GTGCGCGTGG GCCGCGTGGC CGGCGAGTTC
GTCGCCTTCC CGACCTTCGA GGAGCGCGAG CAGAGCGACA TCGACATGAT CGTGTCGGCG
TCGCGCGACG CCATCGTGAT GGTCGAGGGC GGCATGCGCG AGGTGCCCGA GCAGGTGCTG
ATCGACGCGC TGCTGTTCGC CCACGAGGCG GTGCAGCCGC TCATCGACCT GCAGGAGAAG
CTGCGCGCCG CGGTCGGCAA GGAGAAGCGC CCCTTCGAGG CCCCGAGCTT CGACCAGGAT
CTCCTGGCCA AGGTGCAGGA GTCGGCCTGG GAGCGCGTGC GCGAGGCCTT CGAGGTGCGC
GAGAAGCACT CGCGCTCGGC CGCACTGAGC GACGTGCGCC GCGCCCTGGT CGGCGAGCTG
TGCGGCGCCC AGGAGAACGC GACCGAGGCG GTCTACGCCG GCCGCGAGGA CGAGGTCTCC
GAGGCGTACG AGAAGGTCAA GAAGCGCTTC GCGCGGCTCA ACACCCTCGA CAGCAAGCAC
CGCATCGACG GCCGCGCCTA CGACGAGATC CGCGCGATCT CGTGCGAGGT CGGCATCCTG
CCCTCGGCCC ACGGCTCGGC GCTGTTCACC CGCGGCGAGA CCCAGGCGCT GGTGAGCGCC
ACCATGGGCA CGCGCTACGA CGAGCAGAAG CTCGACACCC TGCTCGGCGG CATGCAGAAG
CCCTTCTTCC TGCACTACAA CTTCCCGCCC TTCTGCACCG GTGAGGCCAA GCCGATCCGC
TCGACCTCGC GCCGCGAGCT CGGCCACGGC AACCTGGCCG AGCGCTCCAT CGCCCAGGTC
ATGCCCGAGC GCGAGGACTT CCCGTACACC GTGCGCGTGG TCTCCGAGAT CCTCGAGTCC
AACGGCTCGT CGTCGATGGC CTCGGTGTGC GGCGCCTCGC TGTCGCTGAT GGACGCCGGC
GTGCCGGTGC TGTCGCCGGT GGCCGGCATC GCCATGGGCC TGATGATGGA GGGCGAGCGC
TACGCCATCC TCTCGGACAT CCTCGGCGAC GAGGACCACA TGGGCGACAT GGACTTCAAG
GTCACGGGGA CCGCCCGCGG CGTGTGCGCG CTGCAGATGG ACATCAAGCT CAAGGGCCTC
ACCCGCGACA TCCTGGTCGA GGCGCTCGAG CAGGCCCGCC GCGGCCGCAT GCACATCCTC
GACAAGATGG CCGAGGCGCT GCAGACGCCG CGCGAGGACC TCTCGCCCAA CGCCCCGCGC
ATCGTCACCG AGACGGTCAA GCCCGACAAG ATCCGCGACA TCATCGGCCC CGGCGGCAAG
ACCATCCGCG CCATCGCCGA GCAGACCGGC GCCAAGATCG ACGTCTCCGA CGCCGGCGTG
GTGTCGATCG CGTCGAGCGA CTCGCGCAGC TTGCAGCAGG CCATCGACAT CATCCGCGGC
CTGACCATGG AGCCCGAGGT CGGCCAGTTC TACGGCGGCG TGGTCAAGCG CATCGTCGAG
TTCGGCGCCT TCGTCGAGAT CCTGCCCGGC ACCGACGGCC TGGTGCACAT CAGCGAGCTG
TCGAGCGAGC GCGTGCGCCG GGTCGAGGAC GTCATCCAGG AGGGCGAGGA GATCGTGGTC
AAGTGCATCA GCGTGGACCG CGACGGCAAG ATCCGCCTCA GCCTCAAAGA GGCGGCCGAC
GCCAACCCCG ACGACATCCT GCACTTCGTC GCCTGA
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| Protein sequence | MRFVRESVTV GDKEIIIETG KWAKQASGSV VVRCGDTMVL VTATASKSPR VGMDFLPLTC
EYQEKTYSAG KIPGNFFRRE ARPSTDEVLV ARLMDRPSRP LFPKLWRCET QLIANVVSFD
QSNAADVLAM TGSSCALHIS DIPWDGPVAA VRVGRVAGEF VAFPTFEERE QSDIDMIVSA
SRDAIVMVEG GMREVPEQVL IDALLFAHEA VQPLIDLQEK LRAAVGKEKR PFEAPSFDQD
LLAKVQESAW ERVREAFEVR EKHSRSAALS DVRRALVGEL CGAQENATEA VYAGREDEVS
EAYEKVKKRF ARLNTLDSKH RIDGRAYDEI RAISCEVGIL PSAHGSALFT RGETQALVSA
TMGTRYDEQK LDTLLGGMQK PFFLHYNFPP FCTGEAKPIR STSRRELGHG NLAERSIAQV
MPEREDFPYT VRVVSEILES NGSSSMASVC GASLSLMDAG VPVLSPVAGI AMGLMMEGER
YAILSDILGD EDHMGDMDFK VTGTARGVCA LQMDIKLKGL TRDILVEALE QARRGRMHIL
DKMAEALQTP REDLSPNAPR IVTETVKPDK IRDIIGPGGK TIRAIAEQTG AKIDVSDAGV
VSIASSDSRS LQQAIDIIRG LTMEPEVGQF YGGVVKRIVE FGAFVEILPG TDGLVHISEL
SSERVRRVED VIQEGEEIVV KCISVDRDGK IRLSLKEAAD ANPDDILHFV A
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