Gene Hoch_3836 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3836 
Symbol 
ID8546229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5284927 
End bp5285322 
Gene Length396 bp 
Protein Length131 aa 
Translation table11 
GC content62% 
IMG OID646388505 
Producthypothetical protein 
Protein accessionYP_003268228 
Protein GI262197019 
COG category[S] Function unknown 
COG ID[COG3461] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.242387 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.261244 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAGCG AACAACTTCA CGAGCCAGCC GAGCTGCTCT CGGAAGAGAC CAAGAACATG 
CATCGCGCTC TGGTCACTCT CATCGAGGAA CTCGAGGCTG TCGATTGGTA TCAGCAGCGC
GCCGACGCGT GCAGCGAACC GGGACTACAC GACGTGCTCA TCCACAACAA GAACGAAGAG
GTGGAGCACG CGATGATGAC GCTCGAGTGG ATTCGCCGCC GCTCGCCCGT GTTCGACGCG
CACATGCGCA CCTATCTATT CACCGAACGG CCCATCCTCG AGCTCGAGGA AGAGGACACC
GGATCGTCCT CGTCGGTCGC GGCGTCGCCG ACCTCGGCCC CCTCTCACGG CTCGCTCGGC
ATCGGTAGCC TCCGCCAGGA AGGCAAGGAA GACTAG
 
Protein sequence
MSSEQLHEPA ELLSEETKNM HRALVTLIEE LEAVDWYQQR ADACSEPGLH DVLIHNKNEE 
VEHAMMTLEW IRRRSPVFDA HMRTYLFTER PILELEEEDT GSSSSVAASP TSAPSHGSLG
IGSLRQEGKE D