Gene Hoch_3828 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3828 
Symbol 
ID8546221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5276388 
End bp5277053 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content48% 
IMG OID646388498 
Producthypothetical protein 
Protein accessionYP_003268221 
Protein GI262197012 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00159806 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0338696 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAA TCTCACTTTT TCGATATCTA TCTGTGGCAG CGAGTGTTGC CACAGTGCTC 
CTTCATGGAA AAATAGCATT CGCTGACCTT GAGCATTCGA CAGTAACTGT TGGATTGCGA
GGTGGACCCG TATTGTCCAC GCTGGTAAGA AGCTCGTCTA CAGTGGAAGA AACACCTCGA
CTTTACACAG GCCGCTTGCA TGCTGGCGCT GCCGGTCGCT TTTCGTTCGA AAAAGGCCGT
AAGTGGGGGG TAGGACTCCG TTCCGAAGCA CTCTGGGTCC AACGAGGATT CGAGTCTTCC
AGGGCAGCAG TTTTTGATCT CGACTATCTC GATACAAATC TGTCTGGAGA GTTACGATAT
TTTTTCAACG ATACCATCAA TGGTTATCTA TCAGCCGGCC CCCGTATTGG CCTACTAATC
CAGGCGCACC GTATCGATGC AAACGGTAAT ATCCAAAAAC AAGATCAGCT TGATTTTTTC
GACCTCGGTT TCACTCTGGG GATGGGCGTA AGGTTAGATA TCGGCAACGA CCTAGCATTT
GTGCTTCAAG GGAGTTTTGA ACAGAGCTTG ACGAATATCG ATGATAAGCT GGAGACACCA
GGACTACATA ACCGTAGCTT TCTATGTACT ATTGGTGTGG ACTTGACAGT ATGGCGCTCC
GAATGA
 
Protein sequence
MKKISLFRYL SVAASVATVL LHGKIAFADL EHSTVTVGLR GGPVLSTLVR SSSTVEETPR 
LYTGRLHAGA AGRFSFEKGR KWGVGLRSEA LWVQRGFESS RAAVFDLDYL DTNLSGELRY
FFNDTINGYL SAGPRIGLLI QAHRIDANGN IQKQDQLDFF DLGFTLGMGV RLDIGNDLAF
VLQGSFEQSL TNIDDKLETP GLHNRSFLCT IGVDLTVWRS E