Gene Hoch_3797 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3797 
Symbol 
ID8546190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5216238 
End bp5216780 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content69% 
IMG OID646388467 
Producthypothetical protein 
Protein accessionYP_003268190 
Protein GI262196981 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000697559 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.125112 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACGT CCAACGATTC CGCCCAAGAC CCCGCCGAGC GCAGCTTCTG GAAGCGCTGC 
AGTAGCTGCA AGTCCGAGAT CGCCTTCGGC GCCCTGCACT TCGTGTGCAG TGTGTCGACC
TGCAACCGCA AACGCACCGG CATGAAGTTC TGCTCGGTGC CGTGCTGGGA GGTGCACCTG
CCCATGATGC GCCACCGCGA GGCCTACGCC GAGGAGGAGC GCGCGCCCAG CAAAGACGCG
TGGCTGCGCG AGCAGCGCGC CGAGGCCGAG GCCCAGGAGA GCAGCGCCCG CCGGCGCACC
GTGGTCGCGC CCGCGGCCAA GAGCAGCACG AGCATGGACG ACGAGATCCT GGTGGTGGCC
TCGAAGCTCA AGAAGTACAT CCGCGAGCGC TCGGGCATGA ACACCTCGGA CACGCTGCTG
CCGGTGCTCT CGGCGCACCT GCGCGTGCTG GCCAACCAGG CGATCCGCCA CGCGGCCCAG
GACGGGCGCA AGACCGTGAT GGACCGCGAT CTGGCGATGC CGAGCCAGCG CGATGAGGAC
TAG
 
Protein sequence
MSTSNDSAQD PAERSFWKRC SSCKSEIAFG ALHFVCSVST CNRKRTGMKF CSVPCWEVHL 
PMMRHREAYA EEERAPSKDA WLREQRAEAE AQESSARRRT VVAPAAKSST SMDDEILVVA
SKLKKYIRER SGMNTSDTLL PVLSAHLRVL ANQAIRHAAQ DGRKTVMDRD LAMPSQRDED