Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3789 |
Symbol | |
ID | 8546182 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 5207914 |
End bp | 5209605 |
Gene Length | 1692 bp |
Protein Length | 563 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646388459 |
Product | serine/threonine protein kinase |
Protein accession | YP_003268182 |
Protein GI | 262196973 |
COG category | [K] Transcription [L] Replication, recombination and repair [R] General function prediction only [T] Signal transduction mechanisms |
COG ID | [COG0515] Serine/threonine protein kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.365732 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0988778 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCGGCG AAAAACTCGG CAGCTATCGC GTGGTGCAGA AGATCGGCGA GGGCGGTATG GGCGCCGTCT ACGTCGGCGA GCACGAGCTG CTGTCGCGCA AGGCGGCGAT CAAGGTGCTG CTGCCGATGC TGTCGAATGA CGAGGAGCTG GTGCAGCGCT TCTTCAACGA GGCCAAAGCC GCCACCGTCA TCAACCACGC CGGCATCGTC CAGGTGTTCG ACTTCGGCAC CACGGCCAGC GGCCAGGCCT TCCTGGTCAT GGAGTTCCTC GAGGGCGAGG CGCTCGAGCA GCGTCTGGAA CGGCTCGGCC GCCTGCCCGT GGCCGACGCG CTGCGCATCG TGCGCCACTG CGCGGGCGCC CTGCACGCGG CCCACGAGGT CGGCATCGTC CACCGCGACC TCAAGCCCGA CAACATCTTC CTGGTGCCCG ACCCGCAGGT CGAGGGCGGC GAGCGCTCCA AGATCCTCGA CTTCGGCATC GCCAAGCTCA CCGATGAGCG CCAGAGCGGC TCGGTCAAGA CCCGCACCGG CAGCCTGATG GGCACGCCCA CCTACATGGC GCCCGAGCAG TGCCGCGGCG CCGGCGAGGT CGACCTGCGC GCCGACATCT ACTCGATGGG CTGCGTGCTC TTCCACCTGG TGAGCGGGCG GCCGCCCTTC GTGGGCGCCG GCGTCGGCGA GGTGCTGGCC GCTCACCTGC GCGAGCCCGC GCCCCCGGTG CGCGCCTTTG CGCCCGACGT GCCGCCCGCG GTCGAGGCCC TGATCGCGCG CACCTTGGCC AAAGAGCCGG GCGATCGCTT CCCCGACATG AAGGCCTTCT CCGCGGCCAT CACCGCCGCC GCGCACGGCC AGATGCCGCA GCCGGTCGGC GGCGCGCCGC TGGGGCCGCC GCAGACCCTG GCCGTCGGCG GCGGCGCGCT CGGCTCCGGG CAGGGGCCGG TGCCGGGCTC GTATCCCGGT CAGGGGCCGG TGCCGGGCTC GTATCCCGGT CAAGGGCCGG TGCCGGGCTC GTATCCCGGC CAGGGCATGC ACAGCGGCCA CGGCTCGTAT CCCGGCCAGG GGCAGGGCTC CGGCGTGATG CCGGGCGTCA CCTCCAATCA GCAGGGTCCG CGGCCGGTGA CCGGCTCGAC CCTGGGCGCG GCCGCGGCCC AGAACCTCAC CCAGGGCACC ATGCCCGGGG CCCGGCGCAA GCGCACGGCC TTGATCGCGG GCGCCGCCGT GGCCACGCTC GCGGGCGTAC TCGCGGCCGT GCTGGTGGTG GGCTCGGGCG GCGATGACGA CGAAGAGCCG ACCCAGCTCG CCGCCATCGA GACCCCGGCC GACGCCGCCG AGGTCGCGCT CGCGACCCCG ATCGACGCGG CCGTGGCCGT GGCCGTCGAG GTCGAGGAGC CCGACGCCGC GCCGCCGCAG ATCGCCATCG AAGTCAAGAC CCGCCCCCCG GGAGCCACCG TGTTCCTGGG CGACAGCGAC GAGCCGCTGG GGACCACGCC GTACACCTAT GAAGCTGCGG CCAGCTCCGA GGTGCTCAGC TTCCGCCTCG AGCGCGACGG CTACGAGACC GAGGAGGTCG AGTTCGAGGG CGACACCAAC CAGAGCTTGC GGCTGAGCCT CTCGCGCAAG CGCCGAACGC CGACCAAGCG GCCTCCGAAG AAGCCGGACT CGCCCGGCGG CGATGAGCTG CTGTATCGTT AG
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Protein sequence | MIGEKLGSYR VVQKIGEGGM GAVYVGEHEL LSRKAAIKVL LPMLSNDEEL VQRFFNEAKA ATVINHAGIV QVFDFGTTAS GQAFLVMEFL EGEALEQRLE RLGRLPVADA LRIVRHCAGA LHAAHEVGIV HRDLKPDNIF LVPDPQVEGG ERSKILDFGI AKLTDERQSG SVKTRTGSLM GTPTYMAPEQ CRGAGEVDLR ADIYSMGCVL FHLVSGRPPF VGAGVGEVLA AHLREPAPPV RAFAPDVPPA VEALIARTLA KEPGDRFPDM KAFSAAITAA AHGQMPQPVG GAPLGPPQTL AVGGGALGSG QGPVPGSYPG QGPVPGSYPG QGPVPGSYPG QGMHSGHGSY PGQGQGSGVM PGVTSNQQGP RPVTGSTLGA AAAQNLTQGT MPGARRKRTA LIAGAAVATL AGVLAAVLVV GSGGDDDEEP TQLAAIETPA DAAEVALATP IDAAVAVAVE VEEPDAAPPQ IAIEVKTRPP GATVFLGDSD EPLGTTPYTY EAAASSEVLS FRLERDGYET EEVEFEGDTN QSLRLSLSRK RRTPTKRPPK KPDSPGGDEL LYR
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