| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3785 |
|---|
| Symbol | |
|---|
| ID | 8546178 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 5200811 |
|---|
| End bp | 5201587 |
|---|
| Gene Length | 777 bp |
|---|
| Protein Length | 258 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646388455 |
|---|
| Product | glutamine amidotransferase class-I |
|---|
| Protein accession | YP_003268178 |
|---|
| Protein GI | 262196969 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0518] GMP synthase - Glutamine amidotransferase domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.134927 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.284097 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCACGCA AACAGGTCTT GCTCTACGTC GTCGGTGCGC CCTCGGAAGA CGTGCGCGCG
GAGTTCGGAA CCTACATCGA CTGGTTCGCG CGCCTCTTTG CCGCGCACGA CATCGACGTG
CGCTTCTTCG ACGGGCATCT GGAAGCCGGC GTGGCCGGGC ATCTGTCGCA GCTTCGCGGC
GTCGACGGCG TGGTCATCAC CGGTTCGGCG GCCTCGCTCA CCGTGCCCGA GCCGTGGATG
GACGCCACCA GCGCGATGGT GCAGCGCGCG CATGGCGAGC AGATGCCCTT GCTCGGCGTG
TGTTTTGGCC ATCAGGTCAT CGGCGCCGCC CTGGGTGGGC GAGTCATCCG CAATCCCCGC
GGCTGGCAGC TCGCCTCGGC TGACATCGAG CTCAACGAGC ACGGCCGCGG CGACCCCTTG
TTCGCCGGCC TGGACACGCG CTTCCGGGTC AACCTCAGCC ATCAGGACAT CGTGTGTGAG
ACCTCGCTGG CCAGCGCGCC GCAGCTCCGC GTATTGGCGG GCAATCCCAA GGCCGCCATC
CAGGCGCTGG CGGCGGGGCC GAACATGCGC GGCGTGCAGT TTCATCCCGA GTTCTCGGGG
CCCATCACCT CGGCGTACAT CAAGAGCCGG CACGCCATCT TGGCCGCCGA CGCGCACAGC
CGGCAGGCGG ATGAGGACCA TCCGGATTTG TTGCTCGCCC AGGTATGCGA CAGCCCCGAG
GGCGAGGCCG TGTTGCACAA CTTCCTCACC CACTTCGTGG CCGCGCAGCG GCACTGA
|
|---|
| Protein sequence | MSRKQVLLYV VGAPSEDVRA EFGTYIDWFA RLFAAHDIDV RFFDGHLEAG VAGHLSQLRG
VDGVVITGSA ASLTVPEPWM DATSAMVQRA HGEQMPLLGV CFGHQVIGAA LGGRVIRNPR
GWQLASADIE LNEHGRGDPL FAGLDTRFRV NLSHQDIVCE TSLASAPQLR VLAGNPKAAI
QALAAGPNMR GVQFHPEFSG PITSAYIKSR HAILAADAHS RQADEDHPDL LLAQVCDSPE
GEAVLHNFLT HFVAAQRH
|
|---|
| |