Gene Hoch_3781 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3781 
Symbol 
ID8546174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5192607 
End bp5193782 
Gene Length1176 bp 
Protein Length391 aa 
Translation table11 
GC content71% 
IMG OID646388451 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_003268174 
Protein GI262196965 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.338969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.300645 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGACG TTGTGATTGT GGGGGCCGCG CGAACCCCCA TTGGTAGTTT TCTAGGGTCT 
CTGGCCAGCG TGCCCGCGCC GACGCTCGGC GCCGTGGCCA TCTCGGCCGC GCTCGAGCGC
GCCGGCGTCG CCGCCAGCGA TGTCGACGAG GTGTACATGG GCTGCGTGCT CGCGGCCGGC
CTGGGCCAGG CGCCCGCGCG GCAGGCGGCC ATCGCCGCCG GCATCCCCCA CGGGACGCCG
TGCGACACGG TCAACAAGAT GTGCGGCTCG GGCCTCGAGA CCGTGGTGCT GGCCTATCGC
GCGGTGGCCA TGGGCGACCG CGACATCGTC GTGGCCGGCG GCATGGAGTC GATGTCGAAC
GCTCCGTACC TGCTGCCCAA GGCCCGCTCG GGCGCCCGCA TGGGCCACTT CGAGACCGTC
GATTCAATGC TCAAGGACGG CCTCGTCGAT GCATACAATG GTGACCACAT GGGCGTGTGC
GCCGAGCTGT GCGCGCGCGA GAAGGGCTTT GACCGCGGCG CCCAGGACGA CTACGCGGCC
GAGAGCTACC GCCGCGCCCT GGCGGCGCAA GCGGCCGGTC AGTTCGAGGC CGAAATCGCG
CCGGTGACGA TCAAGGGCCG CAAGGGCGAC ACCGTGGTGT CGGCCGACGA GGAGCCGGGA
CGCGGCGACA TCGACAAGCT GCCCAAGCTG CGCGCGGTGT TCGCCAAGGA GGGCACGGTC
ACGGCCGGCA ACGCCTCCTC GCTCAACGAC GGCGCCGCCG CCCTGGTGCT GATGACGCGC
GAAGAGGCCG ACAAGCGCGG CCTGCCGATC GTCGCCCGCG TCGTGGCCAG CGGCCACCAC
GCGCAGGCGC CGGAGTGGTT CACGACCGCG CCCGCGGGCG CCATCGAGCA GGCCTGCAAG
AAGGCCGGCT GGGAGGCCGC GAGCGTGGAT CTGTGGGAGC TCAACGAGGC CTTCTCGGTG
GTCTCGCTGG CCAACAACGC CATGGTCGGC CTCGACGCCG CCAAGGTCAA CGTGCGCGGC
GGCGCGGTGG CGCTGGGACA TCCCATCGGC GCCTCGGGCG CGCGCATTCT GGTCACGCTG
CTGTACGCGA TGCAGCAGCA GGACGCCAAG ACCGGGGGCG CGTCGCTGTG CATCGGTGGC
GGCGAGGGCA TCGCATTGCT GGTGGAGCGC AACTGA
 
Protein sequence
MRDVVIVGAA RTPIGSFLGS LASVPAPTLG AVAISAALER AGVAASDVDE VYMGCVLAAG 
LGQAPARQAA IAAGIPHGTP CDTVNKMCGS GLETVVLAYR AVAMGDRDIV VAGGMESMSN
APYLLPKARS GARMGHFETV DSMLKDGLVD AYNGDHMGVC AELCAREKGF DRGAQDDYAA
ESYRRALAAQ AAGQFEAEIA PVTIKGRKGD TVVSADEEPG RGDIDKLPKL RAVFAKEGTV
TAGNASSLND GAAALVLMTR EEADKRGLPI VARVVASGHH AQAPEWFTTA PAGAIEQACK
KAGWEAASVD LWELNEAFSV VSLANNAMVG LDAAKVNVRG GAVALGHPIG ASGARILVTL
LYAMQQQDAK TGGASLCIGG GEGIALLVER N