Gene Hoch_3760 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3760 
Symbol 
ID8546153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5166472 
End bp5167089 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content73% 
IMG OID646388430 
Productphosphoribosylglycinamide formyltransferase 
Protein accessionYP_003268153 
Protein GI262196944 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0299] Folate-dependent phosphoribosylglycinamide formyltransferase PurN 
TIGRFAM ID[TIGR00639] phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.234419 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.638022 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATGCG CGGTCCTGCT CTCGGGCGGC GGCACCAACC TGCAGGCGCT GCTCGACGCA 
GAGAGCCGCG GCGAGCTGGC CCCGGGCAGC ATCGAGCTGG TGCTGTCCAA CCGCGCCCAG
GCCCTTGGCG TCGAACGCGC GCGCCGCGCC AGCAAACCGG TCGCCATCGT CGAACACGGC
GACTTCGCCG AGCGCGCCGC CTTCGAGGAC GCCCTGCTCG CCCACATGCG CGAGCACCGC
ATCGAGGCCG TGGTCCTGGC CGGCTTCATG CGCATCCTCG GCGCCCGCTT CGTCGACGCC
TACGCCGGCC GCATCATCAA CACCCACCCG TCCCTGCTGC CGGCCTTTCC CGGCGTCGAC
GCCGCCGCGC AGGCCGTGGC CCACGGGGCC AAGCTCAGCG GCGCCACCGT GCACTTCGTC
GACACCGGCG TGGACACCGG GCCGATCATC GCCCAGCGCG CGGTCCCCGT GCTCGACGAT
GACGACGCCG CCTCGCTGCA CGAGCGCATC CGCGCGGTCG AGCATGCCCT GCTGCCCGAG
GTGGTGCGAA TGCTGGCGGC GGGAGAGCTT TTGTGTGATG GTCGCCGCGT GCGGCGTCAG
CGCGCTGCAT CCGTCTGA
 
Protein sequence
MRCAVLLSGG GTNLQALLDA ESRGELAPGS IELVLSNRAQ ALGVERARRA SKPVAIVEHG 
DFAERAAFED ALLAHMREHR IEAVVLAGFM RILGARFVDA YAGRIINTHP SLLPAFPGVD
AAAQAVAHGA KLSGATVHFV DTGVDTGPII AQRAVPVLDD DDAASLHERI RAVEHALLPE
VVRMLAAGEL LCDGRRVRRQ RAASV