| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3753 |
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| Symbol | |
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| ID | 8546146 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5158135 |
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| End bp | 5160861 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646388423 |
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| Product | DEAD/DEAH box helicase domain protein |
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| Protein accession | YP_003268146 |
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| Protein GI | 262196937 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.237591 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.30492 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCACACG AAATCAGCGC TGCCGATACT CGCGACGCCG CGTCGGCACC CGAATCCAAG
CCGCGCCGCT CGCGTAAACG GCGCGACGCG CAGAGCCGGA ACCAAGAAGG CGAGCGCTCC
ACCGCGAGCG ATGCCGCCGA CACAGAGACC GAAACCGACG AGGCCGAAGC GGAAGCGCCG
CTGCCGAGCT TCGCCGAGCT CGGCCTCCAG CCCGAGCTGC TGCAAGCGCT CGAGGAGATG
GGTTATGACC GGCCGATGCC GGTCCAGGCG GCGGTGTTCC AGCCCCTGAT GAACGGCCGC
GACGTGATGG TCCAGTCGCG CACCGGCTCG GGCAAGACCG CGGGCTTCGG CATCCCGGTC
GTCCAGCACA TCGACGCCGC GTCCAAGGGC GCCCAGGCTC TGATCCTGGC GCCGACCCGC
GAGCTGGCCC TGCAGGTCTC GCGCGAGATC GCACAGCTCG CCAAGCCCAA GGGCCTGCAC
ATCGAGCCGA TCTACGGCGG CGCGCCCATC AAGCCGCAGA TGGACGCCCT GGCCGCGGGC
GCCCAGGTGG TCAGCGGCAC CCCGGGCCGC GTACTCGACC ACCTGCGCCG CAAGACCCTC
GACCCCAAGA ACATCCGCAT GCTCATCCTC GACGAGTGCG ACGAGATGCT GTCGATGGGG
TTCCAGGAGG AGATCGAGCG CATCATCGAG CACCTGCCGG CCAAAGAGAA CCGCCAGACC
GTGCTGTTCT CGGCGACCAT CCCGGACGAG ATCCAGCGCA TCGCTCGCCG GCACATGACC
GACCCGGAGG AGATCAGCCT CTCCACCGGC AACATCAGCG TCGACGACAT CGACCACTCC
TACTACGTGG TCAGCGGCGT CGCCCGCACC CGCGACCTGC TCAAGGTGCT GCGCGCTGAG
TCCCCGGACT CGGCCATCAT CTTCTGCAAC ACCCGCGAGG ACACCAACAC CGTCGCCAAG
TTCCTGCAGG GACAAGGCTA CGACGCCGAG GCCATCTCCA GCGACCTCAC CCAGCGCGAT
CGCGAGCGCG TCATGAAGCG CATGCGCGAC CGCAACCTCG ACTTCCTGGT CGCCACCGAC
GTCGCCGCGC GCGGCATCGA CATCAGCGAC CTCAGCCACG TCATCAACTA CACCTTCCCC
GACTCGCCCG AGGTCTACGT GCACCGCACC GGCCGCACCG GCCGTGCGGG CAAGAGCGGC
GTGGCCATTT CGCTGGTCGG TCCGCGCGAG CTGGGGTCGT TCTATTACTT GAAGTTGATC
TACAAGATCC GCCCGGAAGA GCGTGATCTT CCTACGAATG AGGAGATGGG CATCCTCGAC
GAGGGCGCCC GCTTCGAGCG CGTGGCCGCG CTGGTGAGCG AGGAGCCCGG CGCCGATTCG
CGGGCCCTGG CTCGACGCAT CTGGCAGTCG GACGAAGGCG AGCGCATCTT CGGTGCGCTG
GTGCAGCGAG TGCTCGCCGA CGCTCCCAGC GAGCGCAGCA AGCGCAGCCG CCCCAAGGCT
GAGAATACTC AGCGCAGCGA GGCGCGCCGC TCCGACGAGC GGACCCGCTC CGACCGCTCC
GACCGCTCCG ATCGTTCCGA CGAGCGGTCT CGCTCCGACC GTTCCGACGA GCGGTCTCGC
TCCGACCGTT CCGACGAGCG CCGCGGCCGC CGTGACGACG ACGAGCGCCG TCGCAGCCGC
CGCGACCGCG ACGACGATGA CCGCGGCCGC AGCCGCCGCA GCCGCGATGA TGATACCCGC
GGCCGCGGCC GTCGCGACCG CGATGATGAT ACCCGCGGCC GCGGCCGTCG CGACCGCGAT
GATGATACCC GCGGCCGCAG CCGCCGCGAC CGCGATGACG ACGACCGTGG CCGCAGCCGC
CGCGATGACG ATGGCCGCCG CGACCGCGAC CGCGACGAGC GTCGTGAGCG CGCCGGCCAC
AAGCAACGCG AGGACGCCGC CGACAAGCTC GAGGCGACCG AGGCCGAGCC CGAGGTCGAG
GCCGCTGCCG AGACGAGCGC TCCGGCCTCC GAGAGCGGTG AGCGCCGCAA CCGCGACGAG
CGCCGCGAGG ACCGCCAGGC CCGCCGCGAA GCCCGCGAGG CACGCCGCCA GGAACGCCGC
GAGGAGCGCC ACAGCCGCCG CGACGACGAC GGCAGCCCCG CCGAGTCCGA AGGCGCAGCC
GCCGAGGAGG ACACCGGCCG CAGCGAACGC CCGCGCTCGC GCGGCGACCA GCGCCGCCGC
AACGGCCGTG GTCGCAACGC CGAGTCCGAG GGCGGCGCCA AGGCATCCGG TGACGAGGAG
CCCAAGGAGT TCTGGGAGAC CTGGGCCGAC GAGAAGGCCG AGCGGCAGGA CGACACCGCC
GAGCGGCAGG ACGACACCGC CGAGCGTCCG CGCCGGCGCC GGCGCCGCAG TCGCTCCGAG
GACGCCAGCG ACAGCCGCGC GTCCGCCGCG CCGCGCGGCG AGGAGACCGA GACCGAGACC
GAGACAGAGA TCGAAGATTC GGGTAACCTC AGCGCCCGCC TGTACGTCAA CGTCGGCAAG
CGCGAGGGAC TGAGCGCCGC TCAGGTCCGC GACCTACTCG GTGAGGGACT CGACGACGAC
ACCGCGACCC GCATCGGCTC GGTGGCCCTG CGCAACACCC ACTGCTACGT GCGCGTCCCC
GAGGACATCG CCAACCACGT CATCGCCGCG GCCGAGGGCA AGAGCTACGA GGACCGCGAG
CTGGTGGTCG AGCGCGCTCG CCGCTGA
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| Protein sequence | MSHEISAADT RDAASAPESK PRRSRKRRDA QSRNQEGERS TASDAADTET ETDEAEAEAP
LPSFAELGLQ PELLQALEEM GYDRPMPVQA AVFQPLMNGR DVMVQSRTGS GKTAGFGIPV
VQHIDAASKG AQALILAPTR ELALQVSREI AQLAKPKGLH IEPIYGGAPI KPQMDALAAG
AQVVSGTPGR VLDHLRRKTL DPKNIRMLIL DECDEMLSMG FQEEIERIIE HLPAKENRQT
VLFSATIPDE IQRIARRHMT DPEEISLSTG NISVDDIDHS YYVVSGVART RDLLKVLRAE
SPDSAIIFCN TREDTNTVAK FLQGQGYDAE AISSDLTQRD RERVMKRMRD RNLDFLVATD
VAARGIDISD LSHVINYTFP DSPEVYVHRT GRTGRAGKSG VAISLVGPRE LGSFYYLKLI
YKIRPEERDL PTNEEMGILD EGARFERVAA LVSEEPGADS RALARRIWQS DEGERIFGAL
VQRVLADAPS ERSKRSRPKA ENTQRSEARR SDERTRSDRS DRSDRSDERS RSDRSDERSR
SDRSDERRGR RDDDERRRSR RDRDDDDRGR SRRSRDDDTR GRGRRDRDDD TRGRGRRDRD
DDTRGRSRRD RDDDDRGRSR RDDDGRRDRD RDERRERAGH KQREDAADKL EATEAEPEVE
AAAETSAPAS ESGERRNRDE RREDRQARRE AREARRQERR EERHSRRDDD GSPAESEGAA
AEEDTGRSER PRSRGDQRRR NGRGRNAESE GGAKASGDEE PKEFWETWAD EKAERQDDTA
ERQDDTAERP RRRRRRSRSE DASDSRASAA PRGEETETET ETEIEDSGNL SARLYVNVGK
REGLSAAQVR DLLGEGLDDD TATRIGSVAL RNTHCYVRVP EDIANHVIAA AEGKSYEDRE
LVVERARR
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