Gene Hoch_3730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3730 
Symbol 
ID8546120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5133482 
End bp5134633 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content70% 
IMG OID646388397 
ProductPyrrolo-quinoline quinone 
Protein accessionYP_003268123 
Protein GI262196914 
COG category[S] Function unknown 
COG ID[COG1520] FOG: WD40-like repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.109503 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.588424 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACCAC CGAGTGAGCG GGCGCTGTAC GCGCTCCCGC TGCTGTTTGC CTTGGCCTCG 
GCGGGCTGTA GCCCGATCCC GGCCAACAGC GACGCCTTCG TCACCGCCCG GCGCGGCGCG
ACCGGCACTC CGGTGCTCAA CCACCGCTGG CACGTGAGCG TCGCCGACCG CAGCGGCGAC
GCCAACCCGC AGGAGTTCGC CGAGGTCGCG GTCTTTGGCG AGCGCCTCTA CGTCGGCTCC
GCGCGCGGCG CCCTCGAGGC GCGCTCGACC CGCGACGGCG CGCTCATCTG GAAGCGCGAG
GTCGGCGGCA TCAACGCGGC GCCCACGCTC GACGAGCGCG GACGGCTGTT CGTCGGCACC
GGCGACGGCG TGCTCCTGTG CCTCAACGCC GAGGACGGCG AGGAGCTGTG GCGCTACGAG
TCGCAGGGCA CCATCCTGCA CGCGCCCGTG CTCGTCGACG GCCAGGTCAT CTTCAGCAAC
GAGGCCGACC TGGTGTTCGC GCTCGACGCT GAAGACGGCA AGTTCCGCTG GCAGTACAAG
AGCGACACGC CCGAGGAGTT CACGCTGCAG GGGCACTCGG CCGTCGTCGC CGACGGCGAC
ATGCTGTTCA CCGGCTTCTC CAACGGCAAC CTGGTGGCCC TGCGCCAGAG CACGGGCTCG
GTCGCGTGGC TCACCTCGCT CAAGGGCAAG GCCAGCCGCT TCGTCGATGT CGATAGCACA
GCCGTCGTCT CCGGCGACAC CGTGTACGTG AGCTCGTCGG CTGGCGGCGT CTACGCCCTC
GACAAAGGCA CCGGCCTGGT CCGCTGGCAG TATCCCATCG AGGGCGCCAT CGGCGTCGCC
GTCGATGGGC CGCGCATCTT CGTCACCGCG GCCGACACCG GCGTCCACGC CCTCGACCTC
AGCGGCAACC TGCTGTGGCG TCAGGGCACG CGCGACGGCG GCGACCCGGC CGCGCCGGTG
GTGAGCGGCG ACTACCTGCT GTACACCCTG GGCGACGCCG GCATGTACGT CGCCGACAAA
CGCTCGGGCG AGGTCTTCCA GTACTTCCAG CCCGGCAACG GCGTGTCGTC GACGCCGCTG
GTGCTCGGCA ACGACCTGTA CGTGCTGTCG AATCGCGCGG TGCTCTACGC GATGTTCCTC
AGCCGCGACT AG
 
Protein sequence
MKPPSERALY ALPLLFALAS AGCSPIPANS DAFVTARRGA TGTPVLNHRW HVSVADRSGD 
ANPQEFAEVA VFGERLYVGS ARGALEARST RDGALIWKRE VGGINAAPTL DERGRLFVGT
GDGVLLCLNA EDGEELWRYE SQGTILHAPV LVDGQVIFSN EADLVFALDA EDGKFRWQYK
SDTPEEFTLQ GHSAVVADGD MLFTGFSNGN LVALRQSTGS VAWLTSLKGK ASRFVDVDST
AVVSGDTVYV SSSAGGVYAL DKGTGLVRWQ YPIEGAIGVA VDGPRIFVTA ADTGVHALDL
SGNLLWRQGT RDGGDPAAPV VSGDYLLYTL GDAGMYVADK RSGEVFQYFQ PGNGVSSTPL
VLGNDLYVLS NRAVLYAMFL SRD