| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3722 |
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| Symbol | |
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| ID | 8546112 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5122635 |
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| End bp | 5124917 |
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| Gene Length | 2283 bp |
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| Protein Length | 760 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646388389 |
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| Product | putative transcriptional regulator, Crp/Fnr family |
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| Protein accession | YP_003268115 |
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| Protein GI | 262196906 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.44099 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.232019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTCA GGAATTTGAT CAAAGATCTC CGGCGCAAGC TTCGCAGAGA CGAAGACAAC
CTCGCTCTGC GCCTCGAGCT GGCGGATCTC TGTCGCGACG ACGGCAACCA CGCCGAGGCG
CTCGAGACCT ATCGCGAGGT AGCCATCAGC GCCTGGCAGG CGGGGCGTCT GCAACAGGCG
CAGGATGCGT GCGAGCGCGC GCTCACCATC GCGCCACAGG ACGTCGAACT CAACGCCCTC
ATCGGCGACA TCGACGCCGC CCTGGGGGCG CCGCCCAACG ACGGCGAATC GCGCAATCCC
GGCCCGAAAC GCCGCGCCAA GGTGTGGCAC ACGGCGGCCG GTCCGGCCAC GCCCGCGCCC
GTCGAGGCCG ACAAGGGCCA GCCGCGGCGC AGCAGCCAAC AACGCGCGGC CGCGCCGGAG
CCGCAGAGGC GCGGCACCTC GGAGCTCACG TACACGCCGA CGCCGCTGCC CGCGCCGCTG
CCGCTGCACG ACGCCGCCGA CGACAGCCTG CTGCTGCATC AGCCCGTGGG CATCAAGGCG
CAGCCCTCGG GCCCCGTGCC CACGGTGTCG ATGCCGGCCG ATATCGACAC CGGCGACGAC
GACGTGCTGG CGCTCGCCGG CACCGGCGAT GAGGTCGGCC AGGGCGGCGC CGTCGTGCCA
TCCTTTCACC CGCCCGGCAT CCAACAGCTC GCGACCACGG TGGACGCGAT GTCGACGCTC
GGCGACAGCG CCTCCTCGTC CTTCGGTGAC GACGACGAGG AGGAAGAGAT CACCGACGTC
CGCGGCCTGG GCGCGGAGAC CGGACTGCAT CAGCTCCCGC AGCAGCATGC CGCTATCCCG
CTTCCCAGCG ACGGCGTGCC CAGCGGCGAT AACCGCGATA GTCAGGATCT CACCGCGCCG
CTCGCGCGCG TCAACGCACG CGTCGAGGCG ACCCCGCAGA GCAAGCCATC GCGCTCGCGC
GTGGTGCGCG ACTCGCGTCC CGTCGCCGTC AGCGGCGAAA TCTCTATCTC GGACAGACAG
TCGGAAGCGG CCCCGGCCGA ACGCGCGCCC GACGCCAGCG CGGAGCCACG AGAGGCCTGG
TACGCGGCCG GAGCCGAAGG CGCTGGCAAC GAGGACGACG AAGAAGAGGT CACCGATACC
GGCGCGACCA CGCAGCTCCG ACAGCAGGAC TACGCCGAGG CCCACGCAGC GCCGCAGCGG
GCGTCCACGC TCGCGGGCGC CGGCGTCGAT GACACCGGCC GCGTCGCCGC GCCGCTCGAC
GACGACGAGG ATCCTTCGCC GACGCTGAGC GACACCCAGC CCGTCGATGT CGAGTCGGTT
GATGAGGACA AGCTCGTTGC CGAGCAGGCG GCGCCACGCG GCCGCCGCCG CCGCCGGGCG
GCCGCGAGCA CCCTGGTCGA CATGGCGCCC CCCGTGCAGC CCGCGATGCC CACGCAGAGC
GCGCGAGCGG CCGCGCTGGC GACCATCTTC CCCTCGTTTC CCGCTTACGT GCTCGACGAG
CTGGCCGAGC GCATCACCCT GCGCGAGTTT CGCGACGGCG AGGAGATCCT GCAGCAAGGG
CAGGAGAGCC GCGCCTGTTA CCTGGTGATG TCCGGGTCTG TGCGGCTGTC GCGGCGCGCG
CGCCCGGGCG TGGGCGACGA GATCGCTGAG ACCGGCCTGC TGACCCGCGG CGCGCTGTTC
GGCGTGCGCT CGCTGCTGCC CGAGCGCACC AGCGTGGCGG CGGCCCACGC GGCCGGCCCG
TGCCGCGTCT ACGAGGTGCC GCGGCGCGCG CTGCGCGAGC TGGCGGCCAT CCACCACACC
CTGGGTCCGC TGCTCGAGGT CTTCTACCGC GAGCACCTCA CCGCCATGCT GCTGCACAGC
GCGCCGTTTC TCAGCTCGCT GCCCGCGGCC TGGCGCGATG GCCTGCAGGG CCGCTTTAGG
CCCCTGCGGC GCGCGGCCGG CGAGTCGATT CTGCGCCAGG GCGAACGCAC CGGTGGCCTG
TATCTCGTGG TGCTCGGCGC CGTCGAGATC GTGCAGCGCC TGTCGCCGAG CCGCGCCAAG
CTGCTGGCCA CCATCGGCGA GGGCTGCTTC TTCAGCGATA TGTCCGTGCT GGCCGGCAAA
GACGAGACCG CGGGCGCCTC GGTGTCGGCC GCCGGCCCGC TGGAATTGGC GGTGCTACCG
GCCGAGGAGT TCAGCCGGGT GCTGGCCGAG GCGCCGGCGC TGTGGCGCGA GCTGTGCGAG
CAAGACCCGG ACAGCGAGCT GCTGCGCTGC TCACTGCTCA CCGGCCGAAC TCGCGCCATC
TGA
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| Protein sequence | MKLRNLIKDL RRKLRRDEDN LALRLELADL CRDDGNHAEA LETYREVAIS AWQAGRLQQA
QDACERALTI APQDVELNAL IGDIDAALGA PPNDGESRNP GPKRRAKVWH TAAGPATPAP
VEADKGQPRR SSQQRAAAPE PQRRGTSELT YTPTPLPAPL PLHDAADDSL LLHQPVGIKA
QPSGPVPTVS MPADIDTGDD DVLALAGTGD EVGQGGAVVP SFHPPGIQQL ATTVDAMSTL
GDSASSSFGD DDEEEEITDV RGLGAETGLH QLPQQHAAIP LPSDGVPSGD NRDSQDLTAP
LARVNARVEA TPQSKPSRSR VVRDSRPVAV SGEISISDRQ SEAAPAERAP DASAEPREAW
YAAGAEGAGN EDDEEEVTDT GATTQLRQQD YAEAHAAPQR ASTLAGAGVD DTGRVAAPLD
DDEDPSPTLS DTQPVDVESV DEDKLVAEQA APRGRRRRRA AASTLVDMAP PVQPAMPTQS
ARAAALATIF PSFPAYVLDE LAERITLREF RDGEEILQQG QESRACYLVM SGSVRLSRRA
RPGVGDEIAE TGLLTRGALF GVRSLLPERT SVAAAHAAGP CRVYEVPRRA LRELAAIHHT
LGPLLEVFYR EHLTAMLLHS APFLSSLPAA WRDGLQGRFR PLRRAAGESI LRQGERTGGL
YLVVLGAVEI VQRLSPSRAK LLATIGEGCF FSDMSVLAGK DETAGASVSA AGPLELAVLP
AEEFSRVLAE APALWRELCE QDPDSELLRC SLLTGRTRAI
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