Gene Hoch_3719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3719 
Symbol 
ID8546109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5120503 
End bp5121450 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content77% 
IMG OID646388386 
Producthypothetical protein 
Protein accessionYP_003268112 
Protein GI262196903 
COG category[S] Function unknown 
COG ID[COG5495] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.562569 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGCCG AGACCACGCT GCCGAGCGTC TTCCTCGTCG GCGCGGGCGC GGTCGCCACC 
GCCCTGGCCG GGGCGTTCGC GCGCGCTGGC GTACATGTCT CGGGCTTGTG GGCGCGCCGC
GCCGAGGCCG CGTCGGCCAG CGCGAGCGCG GCCGGGGTGT CGGGCTTCGG TCCCGCGCTG
CCCGCGGCCC TGGGCGAGGC CGAGGTCGTG GTGCTGGCGG TGCGCGACGA CGCCATCGCC
GAGGTCGCGG ACGCGCTGTG GCAGGCGGGC GCCCTGCGAC CCACGCAGGT GCTCGTGCAC
TGCTCGGGCG CGCGCGCGGC GGCCGACGCC CTGGGCATCA CGGCGACCCG CGTGGCCGGC
GCCGCCACCA TGCATCCGCT GCGCGCCATC ACCGCCAGCG CCAGCGCGAC GTCCACGCTG
GCCGGCACGA TCTTCGGCAT CGAAGGCGAC GCTCGCGGGC TGCCGCTGGT CCGCGCATTG
GTGAGCGCGA TCGGCGGCAA AGCGCTCGCC CTCGCGGCCG AGCACATGAC CCTGTATCAC
GCGGCCGCCG CGGTGGCGTC CAACTACACG GTCGCGCTCA TCGACGCCGC GGTCGCGCTG
CTCGCCCGTG CCGGCATCAC CGAGGCCGAG GCCCTGGCCG CGCTGGTGCC GCTGGTCGAG
GGCAGCGTGG CCAACGTCGC CGCGCACGGC ATCGCCGGCG GCCTCACCGG TCCCATCCGC
CGCGGCGACC GCGACACCGT CGAGCGCCAC CTGGGCGCCC TCGACGCCCT CGACGACGAT
CCCGAGAGCG CGCGCCTCTA CCGCGTCCTC GGCCTGCGGG CCACGGACAT CGCGCGCCGA
CAGCGCGGCC GCACCACGCC CGCGCACGAC GCCATCGAAG CGCTGCTGCG CGAACCCAGC
GCACCGAACT CGAAGGCCGC GGATCCCGGC GCCGGAGACG AGCATTGA
 
Protein sequence
MSAETTLPSV FLVGAGAVAT ALAGAFARAG VHVSGLWARR AEAASASASA AGVSGFGPAL 
PAALGEAEVV VLAVRDDAIA EVADALWQAG ALRPTQVLVH CSGARAAADA LGITATRVAG
AATMHPLRAI TASASATSTL AGTIFGIEGD ARGLPLVRAL VSAIGGKALA LAAEHMTLYH
AAAAVASNYT VALIDAAVAL LARAGITEAE ALAALVPLVE GSVANVAAHG IAGGLTGPIR
RGDRDTVERH LGALDALDDD PESARLYRVL GLRATDIARR QRGRTTPAHD AIEALLREPS
APNSKAADPG AGDEH