Gene Hoch_3717 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3717 
Symbol 
ID8546107 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp5118738 
End bp5119910 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content71% 
IMG OID646388384 
Producthypothetical protein 
Protein accessionYP_003268110 
Protein GI262196901 
COG category[S] Function unknown 
COG ID[COG3876] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.582775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCGCGCG TGGTGACCGG CCTCGAGCGA GTCCTCGACG ATCGCCTCGA CGCGCTCGTC 
GGCAAGCGCG TCGGACTCCT CGCCAACCCC ACGACCGTGG ACGCCAACCT GCGTCACGCG
GTCGATCTAT TCGCCGCCCA TCCCGATATC GACCTGCGCG TCTTGCTCGG GCCCGAGCAC
GGCCTGCGCG GCGACGCCCA GGACATGATC TCGGTGGACG ACGCCCGCGA CCCCGCCACG
GGGTTGCCGG TCTACAGCCT CTACGGCACC GACGAGGCCT CGCTCACGCC GCCGCCGCAG
TCTCTGGCCG ACCTCGACGT GGTGGTCTTC GATATCCAGG ACGTGGGCTC GCGCTACTAC
ACCTACGTCT GGACCATGGT GCTCGCCATG CGCGCGTGCG CGGCCGCCGG CGTCGGCTTC
GTGGTGCTCG ATCGTCCCAA CCCCATCGGC GGACACCTGG TCGAAGGTGG CGAGATCGAG
CCCCCGTGTC TGTCGTTTGT CGGCCTGCGC TCGCTGCCGG TACGCCACGG CCTCACCGCT
GGCGAGATCG CCCGCTGGGC GGCCGACGAG GAGAAGCTCG ATCTCGCGCT CGAGATCATC
CCCATGCAGG GCTGGCGCCG CGAGATGTAC TACGAGGACA CCGGGCTGCC GTGGGTCATG
CCATCGCCCA ACATGCCCAC GCGCGACACC GCGCTGGTGT ATCCCGGCAT GTGCCTGATC
GAGGGCACCG AGCTGAGCGA GGGCAGGGGG ACCACGCGCC CCTTCGAGCT CGCCGGCGCG
CCCTTCATCG ACGGCGTGCG GCTGGCCGGG GCGCTCAACA CCTTGCCCGG CCTTGTCGCG
CGGCCGGTGG TGTTCACGCC CATGTTCCAG AAACACGCGC GCACGCCCTG CGGCGGCGTG
CAGCTGCACG TGCGCGATCG CGACGCCTAC CGCCCCTATC TCACCGGCGT GGCCTTCTTG
CACGCGGCCT ACGCGCACTG GCCCGAGGCC TTTGCCTGGC GGCGGCGCGC CTACGAGTTC
GTGAGCGACA TCCCGGCCAT CGATCTGCTG ACGGGCTCGG CGGCGGTGCG CGACGGCATC
GAGGCCGGGG CCTCTCTCGA TGATCTCGCC GCCACCTGGC GCGAACCGGA GAGCGCGTTC
CGCGCGCGCC GCGAGGCGTG GCTGCTCTAC TGA
 
Protein sequence
MSRVVTGLER VLDDRLDALV GKRVGLLANP TTVDANLRHA VDLFAAHPDI DLRVLLGPEH 
GLRGDAQDMI SVDDARDPAT GLPVYSLYGT DEASLTPPPQ SLADLDVVVF DIQDVGSRYY
TYVWTMVLAM RACAAAGVGF VVLDRPNPIG GHLVEGGEIE PPCLSFVGLR SLPVRHGLTA
GEIARWAADE EKLDLALEII PMQGWRREMY YEDTGLPWVM PSPNMPTRDT ALVYPGMCLI
EGTELSEGRG TTRPFELAGA PFIDGVRLAG ALNTLPGLVA RPVVFTPMFQ KHARTPCGGV
QLHVRDRDAY RPYLTGVAFL HAAYAHWPEA FAWRRRAYEF VSDIPAIDLL TGSAAVRDGI
EAGASLDDLA ATWREPESAF RARREAWLLY