Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3702 |
Symbol | |
ID | 8546092 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 5096242 |
End bp | 5100453 |
Gene Length | 4212 bp |
Protein Length | 1403 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 646388369 |
Product | chromosome segregation protein SMC |
Protein accession | YP_003268095 |
Protein GI | 262196886 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.141623 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.135068 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCGCATCA AGCGAATCGA GATCATCGGC TTCAAGTCGT TTTGTGATCG GACGGTCCTC AACATCAGCT CGCCCGTGAC CTCGGTGGTC GGGCCCAACG GCTGCGGCAA GTCCAACATC GTGGACGCCA TCCGCTGGAG CATGGGCGAG CAGTCGGCGC GCCACCTGCG CGGCAAGGCC ATGGACGACG TCATCTTCGC CGGCTCGGAG TCGCGCGGGC CGGCGTCGAT GGCCGAAGTC TCGCTCACCT TCGAGGACGT CGGCTTCTCG CGCGAGACCC TCGAGTTGGC GCTCGACGAG AGCACCGACG ACGTCGATGA GTTCGCCGAG GGCGAGAGCG CCGAGGGCGA GAGCGCCGAG GGCGAGAGCG CCGAGGGCGA GAGCGCCGAG GGCGAGAGCG CCGAGGGCGA GGGCGCCGAG GCCGAGAGCG CGACTGCGGA CGAGAGCGAC GCCGACGCAA TCCCGATGCA TTCGGAGATC GTGCAGCCCA GCGGCGGCGA GCCCCTACCG TACCGGGCCA GCGCCGTGGC CGACACGACG ATCGAAACCT CTGATGAGAC GCAAGCGGCC CAGGACGCCA ACGCCGACGC TGACGCCAGC GAGGCTGCCG CTGAGGCGAC CGAATCGGCC GCAACCGGCG CAGACGACGC CGAGGCCGGC GCGGACACCG CCGAGGCCAG CGCGGACACC GCCGAAGCCG CCCCGGACAC CGCCACGGCC AGCGCGGATG ACGCCGACGC CGGCGAGCCC GGCGCCAACG CGTCGGTCGC GCCGACCGGC ATCCCCAGCC TCGACGGCGA AGAGGCCGGC ATGTCGGCCT CCGAAGAGGT CCAGGAGTTT CTCGAGGACA AGCCGCCGGC CTTTGACTTC GCCTCGTACA GCGAGGTGAC GATCACCCGG CGCCTGTTCC GCGACGGCAC CTCGCAGTAC CTGATCAACC GGGTTCCCTG CCGCCTGCGC GACGTCACCG ACTTCTTCCT CGGCACCGGC GTCGGCACCA AGGCGTACTC GATCATCGAG CAGGGCCGCG TCGGCATGAT CGTGTCCTCG CGCCCGCAGG AGCGCCGCGC GATCATCGAA GAGGCCGCCG GCATCACCAA GTTCAAGACC AAGAAGCGCG CGGCCGAGCG CAAGCTCGAC CAGACGCGCC AGAACCTGGT GCGGGTCTCG GACATCGTCA CCGAGCTCGG CAAGCGCATG GGCTCGCTGC GTCGCCAGGC GCAGAAGGCC GAGCGCTACC GGCGCTACAA GACCGAGCTG CGCGATATCG ACCTGTGGAA GGCCTCGCAC AAGTACCTCG AGTTCCGCGC CGAGGAGAAG CTGCTCAATC ACAACCTGCG CACCTGCCGC ACCAGCCTCG AGGCGGTGCG CACCGAGTAC GAGGCCACCG ACGCCAAGGT GGTGGCCGCG CGCACCGAGC TGGCGGCCGA AGAGCGCCGC CTGGCGACGC TGCAGGAGAC CATCTACGAG CAGGAGAACC GCGTCCGCCT GGCCGAGAAC AAGATCGCCT TCCAGACCCG CGAGGCCGAC GATCTGAGCA CGCGCGCGAG CTCGGCCACC GAGGAGATCG CCGAGCTCGA GAAGCGGCGC GAGGACAGCG TCGCCCAGCT CGAGGTGCAG CGGCAGGAGC TCGAGGCAAT GGTCGAGCAG GCCGAGACCG AGCAGTTCGC GGTCGAGAGC CGCGAGATGG CGGCCGCCGA AGCTCGGCAG ATGCAGGCCA ACGCGCAGTC GCGACTCGAC GAGGCGCGCA ACAAGCTCAC CCAGGCGCGC GCTGAGCAGG TCCGCGCCGA GAGCCGGCGC GAGGCCCTGG GCCGGCGCCG CGACGAGACC GCTCGGCGGC TCGAGCGCAT CATGGGCGAC ACCGAGACCA CGAGCGCGCG GGTGAGCCAG CTCGAGAAGG AGTCGCAGGG GCTCGAGCGC CAGCTCGCCG GTCTGCGCCA GACCCGGCTC GACCTGGGCT CGCAGTCCGA GGGTCTGGAG CACCGCCGCG AGCACCTCGA GGAGTCGGTG CAGCAGTGCG AGACCCAGGT CGACGAGCTG CGCGGCGAGC TGCACCGGCG CCGCTCGCGT CTGCAGTCGC TGGTCGAGAT TCAGGATAAA TACGAGGGCT TTGCCCGCGG TACCCGGGCC ATGATGCAGG CGGTGCAGAA GCCGGCGCCC GAGCGCCAGA ACCTGCTCGC CAACATCCGC GGCCTGGTCG CCGACGTGGT CCGCGCGCCG GCGCAGTTCG AGGCCGCGGT CGAGGCCGCG CTGGGCGACC GCCTGGGCGG CATTCTGGTC TCTGACGCCG ACAGCGGCGC CGAGGCGGTG CGCTTCCTCA AGGACACCAG CGCCGGTCGC TCGGCCTTCG TGCCCTGCCG CGACGCCGGC CCCGCGCCGG CCGATGCTCC GGCGGCGGCC GAGAACCTGC CCCAGGGCGT TCTCGGACGC ATGGCCGAAC TCGTCGCCTT CGCCGATGGC TACGAGCAGG TCGGCCGCCG TCTGCTCGGC GACTGCCTGG TGGTCGACAC CCTGGAGCGC GCGGTCAACC TGCGCGGCAG CGGCCAGAGC GTCACCATGG TCACGCTCGA GGGCGACATC GTCGATGAGC GCGGCGTGGT CCTGGGCGGC AGCCGCGAGG CCCAGGGCGC CAGCGTGCTG GCGCAGAAGC GCGAGATCCG CGAACTCGAA GAGCTCACCG CGCGGCTCGA GGGCGAGCTC ACCGAGGCCA CGGCCCGCTT CGTGTCGACC AAGGCCGAGC ACCAGCAGGT GCAAAAGGCC CTGGAGGCGC TGCGCAAGGA GAGCCATCAG GGCGACATCG CCATCCTCGG CATGGAGAAG GACGTGAGCC GCAGCCGCGG CGAGTTCGAG CGTCTGCGCG AGCGCCTGGC GCAGCTCAAC GCCGAGCAGC TCGAGCTCGA CGAGCGCATG CGCGGCCTGG CCGCCGAGGA GCAGGAGCTC ACCGAGCTGC ACACCACGGC GTCGGACGGC ATCGACGCCT ACGAGCGCGA GCAGCTCGGC CTGATCGAGG CGGTCACCGA CGGCCGCGAG CGGCTCGAAG AGCTCACCCA GATGCTCACC GAGGCGCGCG TGCGCGCCGC CCAGATGGGC GAGAAGCGAG CCTCGATCGA GGCCGCGGTG CTGCGCCTCG AGGCCGGCGA GCGCGAGCTC GGCCAGCGCG TCGCCAAGCT GCAGACCGAC ATCGTCCAGA GCGGCGAGCG CGCCGAGCTG CTGCGCACCG AGTCGGCCGC GCTCGAGGCC GAGCTGGTCG GGGTGCGCGA GGAGCTGGCC CGCAACACCG CCGCCAACGA GGAGGGCCGC AGCGCCTACG ACGAGCGCAT GGTCGCGCTG CAGGCCGACG AGGTGCTGGT GCGCGAGCTG CGCGGCCGCG CCGAGGGCCT GGCCGGCGAG GCCACCCAGC TCGAGGTCAA GCTCGGCAAC CTGGAGGCCA ACCTCTACGC CCTGGGCGAG ACCATCGAGG ATCGCTACCA GGTCAACATC GCCGTGGATC TCTTCGATTA CCACCTGCGG CCGCCGGTGA CGACCACCGA GGACAAGCGC CTGAGCGAGC TCAAGCGGCT CATCGAGCGC ATGGGCTCGG ACATCAACCT CACCGCCATC GACGAGTACG CCGAGGTGTC CGAACGGCAC GAGTATCTGC GCACCCAGCG CGACGATCTC GAGCGCGCGG TCGATCAGCT CGAGGCCGCG ATCCAGAAGA TCAACCGCAC CTCGCGCAAG CTCTTTCGCG ACACCTACGC GGCCGTCAAC GCCAAGTTCC AGGACGTGTT CCCGCGCCTG TTCCGCGGCG GTCAGGCGCG CCTGCAGCTC ACCGGCACCC GCGGCAAGGA CGGCGAGGAG GTCGATATCC TCGACGCCGG CGTCGAGATC ATCGCGCAGC CCCCGGGCAA GAAGAACTCG ACGGTCGACC AGCTCTCGGG CGGCGAGAAG GCGCTCACGG CCGTGGCCCT GATCTTCTCG ATCTTCCTCA TCAAGCCGTC GCCCTTCTGT CTGCTCGACG AGGTCGATGC GCCGCTCGAT GACGCCAACG TGGACCGCTA CAACGAGATC ATCCGCGAGA TGACCGACAG CTCGCAGTTC ATCGTCATCA CGCACAACAA GCGCACCATG GAGATCGCCG ACGACCTGTA CGGCGTGACC ATGCAGGAGC CCGGCGTGTC CAAGCTGGTC TCGGTCAACC TCAGCAAGCT CGACGACCGC GTCGCGGCCT GA
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Protein sequence | MRIKRIEIIG FKSFCDRTVL NISSPVTSVV GPNGCGKSNI VDAIRWSMGE QSARHLRGKA MDDVIFAGSE SRGPASMAEV SLTFEDVGFS RETLELALDE STDDVDEFAE GESAEGESAE GESAEGESAE GESAEGEGAE AESATADESD ADAIPMHSEI VQPSGGEPLP YRASAVADTT IETSDETQAA QDANADADAS EAAAEATESA ATGADDAEAG ADTAEASADT AEAAPDTATA SADDADAGEP GANASVAPTG IPSLDGEEAG MSASEEVQEF LEDKPPAFDF ASYSEVTITR RLFRDGTSQY LINRVPCRLR DVTDFFLGTG VGTKAYSIIE QGRVGMIVSS RPQERRAIIE EAAGITKFKT KKRAAERKLD QTRQNLVRVS DIVTELGKRM GSLRRQAQKA ERYRRYKTEL RDIDLWKASH KYLEFRAEEK LLNHNLRTCR TSLEAVRTEY EATDAKVVAA RTELAAEERR LATLQETIYE QENRVRLAEN KIAFQTREAD DLSTRASSAT EEIAELEKRR EDSVAQLEVQ RQELEAMVEQ AETEQFAVES REMAAAEARQ MQANAQSRLD EARNKLTQAR AEQVRAESRR EALGRRRDET ARRLERIMGD TETTSARVSQ LEKESQGLER QLAGLRQTRL DLGSQSEGLE HRREHLEESV QQCETQVDEL RGELHRRRSR LQSLVEIQDK YEGFARGTRA MMQAVQKPAP ERQNLLANIR GLVADVVRAP AQFEAAVEAA LGDRLGGILV SDADSGAEAV RFLKDTSAGR SAFVPCRDAG PAPADAPAAA ENLPQGVLGR MAELVAFADG YEQVGRRLLG DCLVVDTLER AVNLRGSGQS VTMVTLEGDI VDERGVVLGG SREAQGASVL AQKREIRELE ELTARLEGEL TEATARFVST KAEHQQVQKA LEALRKESHQ GDIAILGMEK DVSRSRGEFE RLRERLAQLN AEQLELDERM RGLAAEEQEL TELHTTASDG IDAYEREQLG LIEAVTDGRE RLEELTQMLT EARVRAAQMG EKRASIEAAV LRLEAGEREL GQRVAKLQTD IVQSGERAEL LRTESAALEA ELVGVREELA RNTAANEEGR SAYDERMVAL QADEVLVREL RGRAEGLAGE ATQLEVKLGN LEANLYALGE TIEDRYQVNI AVDLFDYHLR PPVTTTEDKR LSELKRLIER MGSDINLTAI DEYAEVSERH EYLRTQRDDL ERAVDQLEAA IQKINRTSRK LFRDTYAAVN AKFQDVFPRL FRGGQARLQL TGTRGKDGEE VDILDAGVEI IAQPPGKKNS TVDQLSGGEK ALTAVALIFS IFLIKPSPFC LLDEVDAPLD DANVDRYNEI IREMTDSSQF IVITHNKRTM EIADDLYGVT MQEPGVSKLV SVNLSKLDDR VAA
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