| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3675 |
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| Symbol | |
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| ID | 8546065 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 5054681 |
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| End bp | 5055361 |
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| Gene Length | 681 bp |
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| Protein Length | 226 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 646388343 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003268069 |
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| Protein GI | 262196860 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.000239341 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAACGCGA CCGCCCCCTC GACCGCTCCC TGTCTCGCCT CTGGCATGGC CCTTCGCCCC
GCGGCGACGC GCGACCGCGA TCCCGGCGGC GCGCAGCAGC GCCAGCGCCG CGCCGCCTTC
ACGCGTCACT GCCTACCGCA CCGCGGCGAG CTCTACGCCG TGGCCCTGCG CATGACCCGC
TCGCCCGCCG ACGCCAACGA CCTGGTGCAG GAGACCTTCC TGCGCGCCTA CGCCGCCTGG
TCGGGCTTCG AGCCGGGCAG CAACTGCCGG GCCTGGCTGT TCCGCATCCA GACCAACAGC
TACATCAACC TGTACCGCAA GCGCCGCCGC CACCACCGCA TCGCCACCGC GCACCCCGAG
GACACCCGCG CGGCCGCGCA TCCGCGCGAC GCGGCCCACG CCGCCAGCCC CGAAGAGGTG
CTGCTGGCCG ACGCGCTCGG CGACGAGGTC ACGCGCGCGC TGGGCAAGCT GCGCCCCGAC
TATCGCGAGG TCGTCGAGCT GGCCGACGTG CGCGGCCTGG GCTATCGCGA GATCGCCGAT
GAGCTGTCGC TGCCGCTGGG CACGGTGATG TCGCGCCTGT TTCGCGCCCG CCGCAGCCTC
GAAGGCGAGC TGCGCGCGTT CGCGGCCAAC GACTACGGCA TCGACAGCCG GCGGCAGCGC
CGCGGCCGCG CCGCGACCTG A
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| Protein sequence | MNATAPSTAP CLASGMALRP AATRDRDPGG AQQRQRRAAF TRHCLPHRGE LYAVALRMTR
SPADANDLVQ ETFLRAYAAW SGFEPGSNCR AWLFRIQTNS YINLYRKRRR HHRIATAHPE
DTRAAAHPRD AAHAASPEEV LLADALGDEV TRALGKLRPD YREVVELADV RGLGYREIAD
ELSLPLGTVM SRLFRARRSL EGELRAFAAN DYGIDSRRQR RGRAAT
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