| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3669 |
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| Symbol | |
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| ID | 8546059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5047011 |
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| End bp | 5048366 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646388337 |
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| Product | sigma54 specific transcriptional regulator, Fis family |
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| Protein accession | YP_003268063 |
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| Protein GI | 262196854 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.163956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000814904 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | GTGCCCTCTC CCAACGCCAC CTTCCACACC CGCCAGATCC GCGACGGGGA AGCGCTCGTC
CTGCGTCGGC GCAAGCTGCG TCTGCTCGTC GAAAAAGGCC CCGACCGCAA GCTGCGCCGC
GACTTCGACG CCGACCGCGT GGTCCTCGGC AGCCACGAGA GCTGCGACCT GGCGCTCAGT
GATCGCACGA TCTCGCGCCA GCACTGCGAG ATCGCGCTCT CCCGCGAGGG CTACATCATC
CGCGACCTCG ATTCGACCAA CGGCACCTTC CTCGATCGCG GCAACGTGCG CATCCGCGAG
ATCGTGGTCG ACGGCGAGAC CCGCATCCGC CTCGGCGACA CCAGCGTGCG CATCCAGCCG
CTCGACGAGA CCGTCGATAT CCCGCTCGGC CACGACATCC GCTGCGGCCC CCTGCTCGGC
CGCAGCCCGG CCATGCGCCG GGTCTTCGAC ATCGTCCGCC GGGTCGCGCC CAGCGACGCC
ACCGTGCTCA TCACCGGCGA GTCGGGCACC GGCAAGGAGA TCGCCGCGCG CGCGCTGCAC
GAGCACTCCG GGCGCGCCGA CGGCCCCTTC GTGGTGGTCG ACTGCGGCGC CCTGCCCGGC
AACCTCATCG AGAGCGAGCT CTACGGTCAC GAGCGCGGCG CCTTCACCGG CGCCATCAGC
GCCCGCGCCG GCGCCTTCGA GGCGGCCAAT GGCGGCACCC TGTTTCTCGA CGAGCTGGGC
GAGATGCCCC TGGATCTGCA GACCCGCCTG CTCGGCGTGC TCGAGCGCCG CGTGGTCCAG
CGCCTGGGCA GCACCAGCTC GCGCGCCATC GACGTGCGCG TCCTCGCCGC CACCAACCGC
GACCTGCGCC GCGAGGTCAA CCGCAAGAAC TTCCGCGAAG ACCTCTACTT CCGGCTGGCG
GTGGTGACCA TCGAGATGCC GCCGCTGCGC GACCGCCCCG AGGACATCGC GCTCTACGTC
GAGGACTTCC TGCGCGACAG CGCCGGCGGC GTGCGCATCG ACGCGCCGAC CATGGAGCGC
CTGGCCCAGC AGCCGTGGCC GGGCAACGTG CGCGAGCTGC GCAACGTCAT CGAACGCGCC
ATGGCGCTCG GCGAGGTCGA TGTCCCGGGC GGCGGCACCC GCGCCAGCGA GCGCGAGCAC
TCCCTGCCCC AGGTCGGCGG CGAGATCGAC GTCGAGGTGC CGTTCAAGGT CGGCAAGGCC
GCGCTCATCG AGGAGTTCGA GCGCAACTAC GTCGAGCGCC TGATGGCCAA GCACGAGGGC
AATATCACCC AGGCCGCGCG CGCGGCCGAG ATCGACCGCG TGTACCTGCT GCGCGTGCTC
GACAAGTACG GGATGCGGCC CTCGCGCCGC AAGTGA
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| Protein sequence | MPSPNATFHT RQIRDGEALV LRRRKLRLLV EKGPDRKLRR DFDADRVVLG SHESCDLALS
DRTISRQHCE IALSREGYII RDLDSTNGTF LDRGNVRIRE IVVDGETRIR LGDTSVRIQP
LDETVDIPLG HDIRCGPLLG RSPAMRRVFD IVRRVAPSDA TVLITGESGT GKEIAARALH
EHSGRADGPF VVVDCGALPG NLIESELYGH ERGAFTGAIS ARAGAFEAAN GGTLFLDELG
EMPLDLQTRL LGVLERRVVQ RLGSTSSRAI DVRVLAATNR DLRREVNRKN FREDLYFRLA
VVTIEMPPLR DRPEDIALYV EDFLRDSAGG VRIDAPTMER LAQQPWPGNV RELRNVIERA
MALGEVDVPG GGTRASEREH SLPQVGGEID VEVPFKVGKA ALIEEFERNY VERLMAKHEG
NITQAARAAE IDRVYLLRVL DKYGMRPSRR K
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