| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3651 |
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| Symbol | |
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| ID | 8546041 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 5025794 |
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| End bp | 5028037 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 646388320 |
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| Product | Rhomboid family protein |
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| Protein accession | YP_003268046 |
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| Protein GI | 262196837 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.015996 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACGTCG ATTTCCTCCT GCTCTCGGTG GTCGCGGTCA CCGCCTACCT GGTGCCCGTG
GTCTGGCGAC GCCGGCCGCC GGGACGCCGG GGCTTTGGCT GGCTGCTGCT GGCCGATGGC
GGCGCCGCCC TGCTGGCGCT GCTCGAGCCG CCGGGGATCG ACGCCGAGCT GATCGGTTTC
ATCGCCATCG CCGCGGCCGT GTTCCTGCTG GTGATTCCGC CGCTGCTGCG CGATCTCGTG
CACCGCGCGC TGCGCGCCGA CAAACCCCGC CTGGCCCTGC ATCTGCTGCA GCTCTGGGAG
CTTCTGCAGC CCGGCATGCT GTCGGGCGAG GAGCGCGAGA TGATCGCCAT CCGCGTGGCC
GCGCGCGACG GCAAGATCGA CGCCACCGCG GGCGAGATGC GCGCCCTGCG CGACCGCATC
CCCGATCCCC ACGGCCGTGT GCACATGGAT CACCTGATCG TGTTCCTGTA CCTGAGCGCG
CGGCGCTGGA GCGACGCGGT CCAGGCCTAC GAGCGCCGGC TCGAGGACGA GCCGCTGTCG
CCGCAGACCT GCACCGAGCT GATCTGGGCG TACTGCGAGC TCGGCGACCT GCGCGCGGCC
GCGGCCCTGG TCGAGCGCAT CGCGCAGGCG GCCGAGGCCG GCGAGCCCAT GTGGGGCTAT
CTGGCGCAGC GGGCGCGGCT GATGTTTCTG GCCTTTGCCG GCCAGCGCGA GGCGCTCGAC
GAGCTGTTCG CCGAGGACGG CGCGCTGCGC GCCCTGCCCC GCGCCAGCCA GGCCTTCTGG
TCGGGCGTGG CGCATCTGCG CGCCGGCGAG ACCGAGGCCG CGCGCCAGCT CCTCAAGCGC
GCCTCGCGCT GGACCCGCGG CGACGTGCGC GCCCGCGAGC TGGCGCGGCA GATGCTCGAT
CGGCTCGAGT CGGGCGACGC CGAGCCGGCC GCGATCGCGG CCGTGGAGCT CGACGACGAG
CTGCGCACCG CGGCCGAGGA TTTCCGCCGC GCGGCGCTGG CCGCGCCCGC CCTGCCCCAG
CGCACGCCCC AGGTCGGACG CGTGTCCCTG CGCCAGGTGC CCGTGAGCGC GGCGCTGGTG
CTGGCCAATC TGGCCGCCTT TGCCGCGGTC TACTGGATCT TCGACAGCAC CAGCGACACC
GGCGCCCTGG TGCGTGCGGG CGCCAACGTC AAAGCCTGGG TCACCGAGCG CGGCCAGCTC
TGGCGCCTGC CGACCTCGAT GTTCTTGCAC GTCGGCCTGC TTCACCTGCT GCTCAACGTC
TACGGCCTGT GGATGCTGGG CAAGCTGGTC GAGCAGACCC TGGGCTCGGT GCGCAGCTTT
GGCCTGTACA TGCTGTCCGG CCTGGTCGGC GCCTGGGCCA GCGCGCGCTT TGGCGCCGGC
GGCATCTCGG CCGGGGCCTC GGGCGCTGTG CTCGGCCTGC TCGGCGCGCT GATCGCCGAG
CTGGTCGTCC ACCACCGCGC CTACCCGCGC CACTTCCGCT CGGCCCTGCT CACCCCGCTG
GTGTTCGTGG CCGCGGCCCA GGTCGGCATC GGCTTCTTCT ATCCGGTCAT CGATCAATGG
GCGCACGTGG CCGGCCTGGC CACCGGCGCG TTTGCGGCCA TGGTGCTGTC GCCGCAGTCG
CGGACGCCGC GCGGCGTCTC GCTGGCGCTC GGCGTCCTGC TGAGCGCGCT CGGCGTGGGC
AGCATCGCGC TCGGCGCCCA CGGGGTCGCG ACCACGCGCT ACCGCAGCTT CTTCAACAGC
GCCTGGGAGA CGCAGACCCT GGGCGGCCTG GCGTTTCGCG CGCCGGCCGG GCTGCGACGC
GACTCGGGCG TGCTCATCGA CGGCGTCATG CTGTGGCTGG AAGCGACCAC CTGTCCGAAC
TCGCCGAGCG GCCCGGTGCA CAGCTTGTGC GCGCCGGAGG GCGGCGATGT CGGCGCCCAG
CTCGACCACG CCGAGGCCGT GCTGCGCCGC TCGTGGGGCG AGGCGACGCT GCGCGAGGTC
GAGGCCGAGA GCGGGCCGGC GCCATGGCAG CGGCGCGCCC TGCACGCCAC CGACATCGGC
ATCGATGGCG CGGATCGCTA CCGCATCATG CTGAGCGCGC GCGCCACGCC GAGCGCGACC
TGGCTGTTCA TCATCCAGAC CCCGAGCGCG CTGGCCGACG CGCTCGAGCC GAGCGTGGTC
GAGATGCTCG ACTCGGTGCG TGCGGCAGAT GCGCCCGCGC CCGCGCCCGC GCCCGCGCCC
GCTGCCGATA CCGCCGGCGA CTGA
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| Protein sequence | MYVDFLLLSV VAVTAYLVPV VWRRRPPGRR GFGWLLLADG GAALLALLEP PGIDAELIGF
IAIAAAVFLL VIPPLLRDLV HRALRADKPR LALHLLQLWE LLQPGMLSGE EREMIAIRVA
ARDGKIDATA GEMRALRDRI PDPHGRVHMD HLIVFLYLSA RRWSDAVQAY ERRLEDEPLS
PQTCTELIWA YCELGDLRAA AALVERIAQA AEAGEPMWGY LAQRARLMFL AFAGQREALD
ELFAEDGALR ALPRASQAFW SGVAHLRAGE TEAARQLLKR ASRWTRGDVR ARELARQMLD
RLESGDAEPA AIAAVELDDE LRTAAEDFRR AALAAPALPQ RTPQVGRVSL RQVPVSAALV
LANLAAFAAV YWIFDSTSDT GALVRAGANV KAWVTERGQL WRLPTSMFLH VGLLHLLLNV
YGLWMLGKLV EQTLGSVRSF GLYMLSGLVG AWASARFGAG GISAGASGAV LGLLGALIAE
LVVHHRAYPR HFRSALLTPL VFVAAAQVGI GFFYPVIDQW AHVAGLATGA FAAMVLSPQS
RTPRGVSLAL GVLLSALGVG SIALGAHGVA TTRYRSFFNS AWETQTLGGL AFRAPAGLRR
DSGVLIDGVM LWLEATTCPN SPSGPVHSLC APEGGDVGAQ LDHAEAVLRR SWGEATLREV
EAESGPAPWQ RRALHATDIG IDGADRYRIM LSARATPSAT WLFIIQTPSA LADALEPSVV
EMLDSVRAAD APAPAPAPAP AADTAGD
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