| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3623 |
|---|
| Symbol | |
|---|
| ID | 8546013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4980935 |
|---|
| End bp | 4981783 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 646388292 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003268018 |
|---|
| Protein GI | 262196809 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0434713 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 6 |
|---|
| Fosmid unclonability p-value | 0.000148165 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | decreased coverage |
|---|
| |
Sequence |
| Gene sequence | ATGTCGTCCG TGCGCCCATG GGGGTGGTGT GTGAGTGAGA AAGACGAAGC TCGCGAGAGC
GATAGCGAGA ACGCGGCCAC GCCGCGCCCC GAGCCGCGCG TCGGAGAACT CTTTGATCGC
GGCGCCGAAG CGCTCGAGGA CGAGGAGCTC GATCCCGAGA CCATCGCCCA GCTCGCCGCC
TGGTTTGGTG GACCTGCTCC CGATGCTGGC GGCGCCGCGA CCGCGCAGAC GACCAGCGCG
CACGTCGCGC GTCCGAACAA ACTGCCGCCC CTGGAGGCCG CGCGGCGCCG TGCGAACGCG
CTGCGCGGCG TGGAGCCCGG GTTTCTGCGT CACATGGAGC GCAAGTGGCG TGGCGCCGAG
GCGCTTCTCG GCGTGAGCAA GCTCGTGGGG GCGAGCGCGC GCGGACCCAT CAGCGAGTTC
GACCACACCA CCGGCTGGCT GTTCGCGGGA CTCGAGGAGG CGACGCAGCA CGAGCAGCGG
CGCCCCGAAG AGGTCGCCGA TTGGCTCACC GAGCCGACGC CGCAGGCGAT CCTGCGCGAC
CTGCACCGCC CCGATCAGAC CTGGCCCAAA CGCATCGTCT CGCAGGACGT CGGCCCCGAC
GTCGCCGGCG CGCAGATGCG CACCAAGCTC GACGAGATCC TGCACACCGT CTATGCCGTA
CGCATGGACG ACGAGCCGGT TCCCGCGCGC CTGGTCGCCG AGGACATGCA CGCGCTGCGC
TTGCGCCTCG ACGAGCCCTG GGAGGATTCG TACGTGCCAC CCGAAGAGCG CCGCGGCGAG
GGCAGCTACG CGCCCACGGC CGAGGACATG AAGTGGTTCG GCATCGTCGG CTTCGATCCC
GACCTATGA
|
|---|
| Protein sequence | MSSVRPWGWC VSEKDEARES DSENAATPRP EPRVGELFDR GAEALEDEEL DPETIAQLAA
WFGGPAPDAG GAATAQTTSA HVARPNKLPP LEAARRRANA LRGVEPGFLR HMERKWRGAE
ALLGVSKLVG ASARGPISEF DHTTGWLFAG LEEATQHEQR RPEEVADWLT EPTPQAILRD
LHRPDQTWPK RIVSQDVGPD VAGAQMRTKL DEILHTVYAV RMDDEPVPAR LVAEDMHALR
LRLDEPWEDS YVPPEERRGE GSYAPTAEDM KWFGIVGFDP DL
|
|---|
| |