Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3620 |
Symbol | |
ID | 8546010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | + |
Start bp | 4978715 |
End bp | 4979395 |
Gene Length | 681 bp |
Protein Length | 226 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 646388289 |
Product | hypothetical protein |
Protein accession | YP_003268015 |
Protein GI | 262196806 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0118725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.000131742 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGAAGCGAC CCGACCTGAG AGAGATCGCG GGCAATATCC GCGAAGCCCT GGACGACTGC GACCGCGATG CGCTGCTCGA CATGCTCACA TTCGTGTTCA AAGAGTATGT CGTCGAGGGC CCGCCGCCGC TGCTGGTGAG CCAATCCGAG CGCATCGAGG ACCTCGAGGG GCTGTCCTTT GCAGAGCTCA TCCGCGCTCT GCAGACGCGC CTCGATGTGC CTGAGCTGGC CATGTTCCAG GTCGATAACA ACCAGGTCTC GGTGCGCGTA AATGGTGTGC TCACACCGCT GCAGGCGACC CCGAGCGCGC CCGAGCGGAC GCCCCCGGTG ACCCAGGTCC AGGTGGTCGA AAACCGCATG CCGCAGCCGC CTGCGCGGCC GCCCGGGGCC CCGGCAGCCG CTGCCGCGCC CGCAGCGCCG TCCTCGTCCG TACGTCCGAA TTCCGCGGCC GCGGCCGCGT CCCAGCCCGC CGCGGCGCCG CGCCCCACCG GCGGCCTGTC CGTGCGCGGC CGTCCGGCGG CGCAGAGCCC GTCCCCGCAG CAGGGTGGTG GTGCAGCCGC GCAGCGACCG GCGGCGGCTC CCGCGTCTCC GCCGCCCGCG CGTGAGCCTG CGCCCGAGCC GAAGCCGCCC GAGGACACCG ACGCGGCGGC CGAGCGCTTC AGCCTGCTGG AGCTCGACTG A
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Protein sequence | MKRPDLREIA GNIREALDDC DRDALLDMLT FVFKEYVVEG PPPLLVSQSE RIEDLEGLSF AELIRALQTR LDVPELAMFQ VDNNQVSVRV NGVLTPLQAT PSAPERTPPV TQVQVVENRM PQPPARPPGA PAAAAAPAAP SSSVRPNSAA AAASQPAAAP RPTGGLSVRG RPAAQSPSPQ QGGGAAAQRP AAAPASPPPA REPAPEPKPP EDTDAAAERF SLLELD
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