Gene Hoch_3620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3620 
Symbol 
ID8546010 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4978715 
End bp4979395 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content73% 
IMG OID646388289 
Producthypothetical protein 
Protein accessionYP_003268015 
Protein GI262196806 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0118725 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000131742 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAGCGAC CCGACCTGAG AGAGATCGCG GGCAATATCC GCGAAGCCCT GGACGACTGC 
GACCGCGATG CGCTGCTCGA CATGCTCACA TTCGTGTTCA AAGAGTATGT CGTCGAGGGC
CCGCCGCCGC TGCTGGTGAG CCAATCCGAG CGCATCGAGG ACCTCGAGGG GCTGTCCTTT
GCAGAGCTCA TCCGCGCTCT GCAGACGCGC CTCGATGTGC CTGAGCTGGC CATGTTCCAG
GTCGATAACA ACCAGGTCTC GGTGCGCGTA AATGGTGTGC TCACACCGCT GCAGGCGACC
CCGAGCGCGC CCGAGCGGAC GCCCCCGGTG ACCCAGGTCC AGGTGGTCGA AAACCGCATG
CCGCAGCCGC CTGCGCGGCC GCCCGGGGCC CCGGCAGCCG CTGCCGCGCC CGCAGCGCCG
TCCTCGTCCG TACGTCCGAA TTCCGCGGCC GCGGCCGCGT CCCAGCCCGC CGCGGCGCCG
CGCCCCACCG GCGGCCTGTC CGTGCGCGGC CGTCCGGCGG CGCAGAGCCC GTCCCCGCAG
CAGGGTGGTG GTGCAGCCGC GCAGCGACCG GCGGCGGCTC CCGCGTCTCC GCCGCCCGCG
CGTGAGCCTG CGCCCGAGCC GAAGCCGCCC GAGGACACCG ACGCGGCGGC CGAGCGCTTC
AGCCTGCTGG AGCTCGACTG A
 
Protein sequence
MKRPDLREIA GNIREALDDC DRDALLDMLT FVFKEYVVEG PPPLLVSQSE RIEDLEGLSF 
AELIRALQTR LDVPELAMFQ VDNNQVSVRV NGVLTPLQAT PSAPERTPPV TQVQVVENRM
PQPPARPPGA PAAAAAPAAP SSSVRPNSAA AAASQPAAAP RPTGGLSVRG RPAAQSPSPQ
QGGGAAAQRP AAAPASPPPA REPAPEPKPP EDTDAAAERF SLLELD