| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3613 |
|---|
| Symbol | |
|---|
| ID | 8546003 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4971840 |
|---|
| End bp | 4972313 |
|---|
| Gene Length | 474 bp |
|---|
| Protein Length | 157 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 646388282 |
|---|
| Product | FHA domain containing protein |
|---|
| Protein accession | YP_003268008 |
|---|
| Protein GI | 262196799 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.140351 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00128978 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACCG CCGCAATCGT GAGCGTGGTG GTCGGCGCCG CGCTGCTCGT GCTCATCGCC
GTGATCCTCA TCGTCCGCCA CGGCGGCAAC GGTGGGGCCG CGCAGGTTCC GCGCCGCATG
TGCGGCGGAT GCCAGCGCGC GATGATGCCA GAGTGGGACA AATGTATGTT CTGCGGCTGG
ACGCCGGTGG CGCGCATCGA GTTCCTCAGC GGGCCGATGA CGGGTCACCT GATCCCGCTC
TCCGAGGAGG TCACTACGGT CGGCTCGGTC GCCGGCAACA CCGTGGTGCT CTCGGATCCG
GCGGTGTCGC GCAAGCATCT CGGGATTCGC CGGGTCGGCA GCACCTACGA GCTGGCCGAC
CTGGGCTCGA CCAACGGCGT CTACGTCAAC GGCCATCGCA TGCCGAAGAA GACCCTGGTC
CCGGGCGATG TCTTGCGCGT GGGCAATACC GAGATGGTCT TCCGGCGCGA GTGA
|
|---|
| Protein sequence | MSTAAIVSVV VGAALLVLIA VILIVRHGGN GGAAQVPRRM CGGCQRAMMP EWDKCMFCGW
TPVARIEFLS GPMTGHLIPL SEEVTTVGSV AGNTVVLSDP AVSRKHLGIR RVGSTYELAD
LGSTNGVYVN GHRMPKKTLV PGDVLRVGNT EMVFRRE
|
|---|
| |