| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3612 |
|---|
| Symbol | |
|---|
| ID | 8546002 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4970222 |
|---|
| End bp | 4971766 |
|---|
| Gene Length | 1545 bp |
|---|
| Protein Length | 514 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 646388281 |
|---|
| Product | FHA domain containing protein |
|---|
| Protein accession | YP_003268007 |
|---|
| Protein GI | 262196798 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG1716] FOG: FHA domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.323456 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00187032 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGCG TCATGACCCG ATACCGCGGC GTCCGTTGCA GGACCTTGGC CGCGTACCTG
GCGTTTGCGA TGCTGCTTGC GTTGGCCGCA CCTGCGCGTG CCCAGCAGAT CGACGTCGAA
CTCTCGGTCC AGGACTCGCC GCCGATCGAG AACGAGGACG GCGATAAAGA GTGGGCGCCG
CCGACCTTCC GCGCTGTCAT CATCGGCGCG ATTCCGGGCC TGGCGGCCGA GCAGTTCGTC
CTCCGGCAAG AGGACGCTAA AGAGCCCTTC GAGACCCCGG CGGACAAGGT CAAGTCGTAC
ACCGAGAGCG ACGACCGCAT GGCCCTGGTC GTGCTCATCC AGGGCGACGA GCGCTGGATG
GGCAACGAGA CCTACCTCGA TGAGGAGGAT CCCGACCGCC TGGTCGGCGC CTACGTCGGC
CTCGGTCCCT CGCTCGACGC CCTGGCTACG GCGGGTCCGC CGGGCTCGCG CGCCGGTCTG
CTGATCTACG CGGCCGGCAA GGCCGAGCCC AGGCAGGCCA TGGGCGAGGC CACGCAGCTC
AGCGCCTCGG CGCTCGGGCA GCAGAAGGAC TACGCCACCA ACATCGGCAT CCCGCTGCTG
GTCGGCCTCG ACGAGGCCAT CAACATCTTC GACCAGCACC CGGGCTACCG CAAAATCCTG
GTCGTCGTCG GCGACGGCAC CGGCCAGGAA GAGGACATCT CGGCCGGCCT CAAAGACCGC
GTCGACAAGC TCAAACAGCG CAAGGTCGAG ACCTTCACGA TCCACTACGA GTCCATCGCC
TCGGGCTCGC CGGTGGGTCA GAACAACATG AAGAAGCTCG GCTACACCGA GGCCAAGCAC
GCCACCTCGC GCGACAACTT CGACGCCTTC GCCAAGCAGT TCGTCGAGTA TATCGGCGCC
CGCTACTACG CGACCTTCCC CGCCTGCAAC AGCAAGGAGC CGCGCACCTG CTTCGAGATG
GACAACGAGA TCCGCGATTT CGTGGTCATC GCCGGCGACA TCGAGAGCGA CATCCTGTCG
GTCAAGACCC CGGGGCCGCC GCCCAAGGAG GAGGAGTCCT CGCTGTGGTG GCTGTGGCTC
TTGCTCGGCC TGCTCGCGGT GGTGCTCATC GTCGTCATCG TGGTCAAAGT GCGCAATCGC
CCGCCGCCGG AGCCGGTCTT CGTGCCGGCG ATGGAGGTGC CGATGCCCGA GCCCGGTCCG
GGGCCCAAGA CCATGGCCAT CGACACCGGC CTGAACTCCG GCGGCCTGCC CATGGTCGGC
TGGATCGTGC CGCTCACCGG TCCCAACCAG TTTCAGACCT TCAAGCTGAT GTCGGGTGTG
ACCAAGATGG GTTCGGGTCA CGACTGCAAC GTGGTCATCG ACGACCAGTT CATGAGCCAC
TACCACGCCG AAATCGTGGC GTCCCCCATG GGCTTCACGC TCAAGGACGG CGGATCGACG
AACGGCACCT ACGTCAACGA TCGGCGGGTA TCCACCCATG AACTGGTGGA TAACGACATG
TTGACGATGG GTAAAACCAA CTTCAAGTTC AAGTCGATTA ACTGA
|
|---|
| Protein sequence | MNRVMTRYRG VRCRTLAAYL AFAMLLALAA PARAQQIDVE LSVQDSPPIE NEDGDKEWAP
PTFRAVIIGA IPGLAAEQFV LRQEDAKEPF ETPADKVKSY TESDDRMALV VLIQGDERWM
GNETYLDEED PDRLVGAYVG LGPSLDALAT AGPPGSRAGL LIYAAGKAEP RQAMGEATQL
SASALGQQKD YATNIGIPLL VGLDEAINIF DQHPGYRKIL VVVGDGTGQE EDISAGLKDR
VDKLKQRKVE TFTIHYESIA SGSPVGQNNM KKLGYTEAKH ATSRDNFDAF AKQFVEYIGA
RYYATFPACN SKEPRTCFEM DNEIRDFVVI AGDIESDILS VKTPGPPPKE EESSLWWLWL
LLGLLAVVLI VVIVVKVRNR PPPEPVFVPA MEVPMPEPGP GPKTMAIDTG LNSGGLPMVG
WIVPLTGPNQ FQTFKLMSGV TKMGSGHDCN VVIDDQFMSH YHAEIVASPM GFTLKDGGST
NGTYVNDRRV STHELVDNDM LTMGKTNFKF KSIN
|
|---|
| |