Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3599 |
Symbol | |
ID | 8545989 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4954556 |
End bp | 4955515 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 646388268 |
Product | 5-amino-6-(5- phosphoribosylamino)uracilreductase |
Protein accession | YP_003267994 |
Protein GI | 262196785 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1985] Pyrimidine reductase, riboflavin biosynthesis |
TIGRFAM ID | [TIGR00227] riboflavin-specific deaminase C-terminal domain [TIGR00326] riboflavin biosynthesis protein RibD |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00922872 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCTGTCCG AATCCCTGGC CTGGCAGGCC GTCCTGAGCT GGGACCGACT GCTCACCCGC CGCGACGATG CCGGCCCGGC GGCGCCCGCC TACCTGGTGA CCCCGACGCA CAGCCGCGCG CTCGCCGCGG GCGACGACGA CGATGCCGCC GAGGCCGCGC TGGCCAGCGC CGGCGCGCAG GCCCTGCTGG TGCGCCCGCC GCCTCCGCAG AATCCGCCCA AGACCGCGGC GGCGCCCACC TGGCGCGCCG CCGGCGAGAT CGAGGACGCG GCCGCGCGGC TGCTCGACCT GTACCTGCCC CTGGTCCTGG CGCGCGCCCC GGCCGGCGGC CGCCCGCGCG TCATCGCCCA CCTGGCGCAG AGCCTCGATG GCCGCATCGC CACCGCCTGC GGCACCTCGC AGTGGATCAG CGGCAACCAG GACCTGGTCC ACAACCACCG CATGCGCGCG CTGTGCGACG CCGTGCTGGT CGGCGCCGAG ACCGTCATCC ACGACGACCC GCAGCTCACC TGCCGCGAGG TCGAGGGCGC GCATCCCACG CGCGTGGTGC TCGACCCCCG CGGCCGCGTG AGCGCCGAGC GGCGCATCTT CCAGGACCGC GTGGCGCCGA CCGTGGTCAT CGGCAACCAG GAGGGCGAGC ACGCCCTGCC CGCGCACGTC ACCCGCCTCC AGGTCGGCAC CCCGGGCGCC CGCATCGCGC CCGGCGACAT CCTCGACGCC CTCGCTGTCC ACGGTATCCA CCGCCTGTTC GTCGAGGGCG GCGGCCTCAC CGTGTCGGCG TTCTTGCAGG CCGGCCTGCT CGACCGCCTG CAGATCACGG TGGCCCCGAT GATCATCGGC TCGGGCCGCG CCAGCATCTC GCTGCCCGAT ATCGACTCCC TCGAGCACGC GCTGCGCCCC GAGGTGCGGC GCTTCGTGTT CGACACCGAC GTGATGTTCG AGTGCGTGTT CGCGCGCTGA
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Protein sequence | MLSESLAWQA VLSWDRLLTR RDDAGPAAPA YLVTPTHSRA LAAGDDDDAA EAALASAGAQ ALLVRPPPPQ NPPKTAAAPT WRAAGEIEDA AARLLDLYLP LVLARAPAGG RPRVIAHLAQ SLDGRIATAC GTSQWISGNQ DLVHNHRMRA LCDAVLVGAE TVIHDDPQLT CREVEGAHPT RVVLDPRGRV SAERRIFQDR VAPTVVIGNQ EGEHALPAHV TRLQVGTPGA RIAPGDILDA LAVHGIHRLF VEGGGLTVSA FLQAGLLDRL QITVAPMIIG SGRASISLPD IDSLEHALRP EVRRFVFDTD VMFECVFAR
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