Gene Hoch_3593 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3593 
Symbol 
ID8545983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4948150 
End bp4948944 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content75% 
IMG OID646388262 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003267988 
Protein GI262196779 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.127236 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0102117 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGACG CCAATGCCGA TCACATTCTC GTAGAGCGCC GCGACGCCGG CGTGGTGTGG 
GTGACTCTCA ACCGGCCGGC GGCGCGCAAT GCGCTGTCGC TGGCGGTCAA CCGCGACCTG
CGCGCGCTCG CCGGCGAGCT CGGCCGCGAC CCCGAGGTGC GCGCCGTGGT GCTCACGGGC
GCGGGCGACA AGGCCTTCTG CGCCGGCGCC GACCTCAAGG AGCGCAAGGG CGTGAGCGCG
GCCGATACGC CGCCCTATAT CGACGCGATC AGCGGCGCCA TCGACGCCTG GGCGCGGCTG
CCCAGGCCGA CCATCGCGCT GATGAACGGC CACGCCTTCG GCGGCGGGCT CGAGCTGGCG
CTGGCGTGTG ACTTCCGCAT CGCCGCGGCC AGCGCGCAGA TGGCGCTCAC CGAGGTGCGC
CTGGGCATCA TGCCCGGGGC CGGCGGCAGC CAGCGCCTGC CGCGCCTCAT CGGCGTCGCC
CGCGCCAAAG AGCTGATCCT GCTGGGCCGC CGGGTGACGG CCGCGCGCGC GGCCGAGATC
GGCCTGGTCA CCCAGGTGGC GCCGGCCGAG GAGCTGGGCA CCGCGGCCGA GGCGCTGCTC
ACCGACCTGG CCGCGTGCGC GCCGCGTTCG GTGGAGATGG CCAAGGAGGC CATCGACCGC
GGCGTCGAGG TCGGCATCGA CGAGGGCCTG CGCATCGAGC GCGCGTGCTA CGAGGTGACC
CTGTTCACCG AGGATCGCGA CGAGGGCCTG CGCGCCTTCG CCGAGGGCCG CGCGCCCAAC
TATCGCGGCC GCTGA
 
Protein sequence
MADANADHIL VERRDAGVVW VTLNRPAARN ALSLAVNRDL RALAGELGRD PEVRAVVLTG 
AGDKAFCAGA DLKERKGVSA ADTPPYIDAI SGAIDAWARL PRPTIALMNG HAFGGGLELA
LACDFRIAAA SAQMALTEVR LGIMPGAGGS QRLPRLIGVA RAKELILLGR RVTAARAAEI
GLVTQVAPAE ELGTAAEALL TDLAACAPRS VEMAKEAIDR GVEVGIDEGL RIERACYEVT
LFTEDRDEGL RAFAEGRAPN YRGR