Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3589 |
Symbol | |
ID | 8545979 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4944031 |
End bp | 4944525 |
Gene Length | 495 bp |
Protein Length | 164 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 646388258 |
Product | protein tyrosine phosphatase |
Protein accession | YP_003267984 |
Protein GI | 262196775 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.164977 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00146697 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGTCGGCCG CCGTTCATCT GTGCTTCGTC TGTCTCGGCA ACATCTGCCG CTCACCGACC GCCGAGGGCA TCATGCGCGC CCTGGTCGCC GAGGCCGGGC TGAGCGAGCG CATCGCCATC GACAGCGCCG GCACCGGCGC CTGGCACGCG GGCGAGGCCC CCGACGCCCG CGCGCGCGCC GCCGCGGCCG CGCGCGGGCT GCGGCTTGAG GGACAGGCCC GGCAGTTTCT GCACAGCGAC TTCGAGCGCT TCGACTACGT GCTGGCCATG GACAGCGCCA ACCTGCGCGA TCTGCGCCGG GCCGCGCGCC TGCCGCAGCA GCGCGACAAG CTCCACCTGT TCCGCAGCTT CGATGACACC GCCCCGCCCG GCGCCGAGGT CCCCGACCCC TACTACGGCG GCGAGGGCGG CTTCGACGAG GTGCTCGACA TCTGCGAGCG CGCCTGCCGC GGGCTGCTCG CGCACCTGCG CGGGCACCAC GAGCTGGAGG CCTGA
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Protein sequence | MSAAVHLCFV CLGNICRSPT AEGIMRALVA EAGLSERIAI DSAGTGAWHA GEAPDARARA AAAARGLRLE GQARQFLHSD FERFDYVLAM DSANLRDLRR AARLPQQRDK LHLFRSFDDT APPGAEVPDP YYGGEGGFDE VLDICERACR GLLAHLRGHH ELEA
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