Gene Hoch_3589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3589 
Symbol 
ID8545979 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4944031 
End bp4944525 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content74% 
IMG OID646388258 
Productprotein tyrosine phosphatase 
Protein accessionYP_003267984 
Protein GI262196775 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.164977 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00146697 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCGGCCG CCGTTCATCT GTGCTTCGTC TGTCTCGGCA ACATCTGCCG CTCACCGACC 
GCCGAGGGCA TCATGCGCGC CCTGGTCGCC GAGGCCGGGC TGAGCGAGCG CATCGCCATC
GACAGCGCCG GCACCGGCGC CTGGCACGCG GGCGAGGCCC CCGACGCCCG CGCGCGCGCC
GCCGCGGCCG CGCGCGGGCT GCGGCTTGAG GGACAGGCCC GGCAGTTTCT GCACAGCGAC
TTCGAGCGCT TCGACTACGT GCTGGCCATG GACAGCGCCA ACCTGCGCGA TCTGCGCCGG
GCCGCGCGCC TGCCGCAGCA GCGCGACAAG CTCCACCTGT TCCGCAGCTT CGATGACACC
GCCCCGCCCG GCGCCGAGGT CCCCGACCCC TACTACGGCG GCGAGGGCGG CTTCGACGAG
GTGCTCGACA TCTGCGAGCG CGCCTGCCGC GGGCTGCTCG CGCACCTGCG CGGGCACCAC
GAGCTGGAGG CCTGA
 
Protein sequence
MSAAVHLCFV CLGNICRSPT AEGIMRALVA EAGLSERIAI DSAGTGAWHA GEAPDARARA 
AAAARGLRLE GQARQFLHSD FERFDYVLAM DSANLRDLRR AARLPQQRDK LHLFRSFDDT
APPGAEVPDP YYGGEGGFDE VLDICERACR GLLAHLRGHH ELEA