Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3587 |
Symbol | |
ID | 8545977 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4942149 |
End bp | 4943039 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 646388256 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003267982 |
Protein GI | 262196773 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.00848755 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCCAAAAG CGCGCGTCGG CGATATCGAG CTGCACTACG AGAGCGAGGG CGAGGGGCTG CCGCTGGTGC TGATCATGGG CATCGGGACC CAGCTCACGG CCTGGCCCGC GGGCCTGCGC GCGGCTCTGG TCGAGCGCGG CTTGCGCGTG ATCCGCTTCG ACAACCGCGA CATCGGGCTA TCGTCGAAGC TCACTCATCT GCCCGTGCCC AAGCTGCGCC GCGTACTCAC GCGCACATTG CTGGGGATGC TGCAAGATGT CCCGTACACG CTCGAGGACA TGGCCGCCGA TACCGCCGGT CTGCTCGACG CCCTCGAGCT CGACAGCGCG CACATCCTCG GTGCATCGAT GGGCGGGATG ATCGCCCAGG TGATGGCGCT CCATCATCCG CAGCGGATGC GCAGCCTGTG CTCGGTGATG TCGCACCCGG GCAACCTGCG CAGCATGGTC GCGCGGCCCA AGGCGTACCG GGCGCTGATG TCGCCGCTGC CCAAGGAGCA CGAGGCCGCG GTCACCCACA TGGTCGGCGT GATGCGCGCG CTCTCGGGCT CGGGCTTCCC CTTCGACGAG GACGCCGCGC GCGCGTATCT CGACCTCGCC ATCGCCCGCT CGGTGCATCC GCAGGGCTTT CTGCGCCAGT TCGCCGCCAT CGCGGCCGCG CCCAATCGCA TCCCGGCGCT GCGCTCGCTG CGCATGCCCT CGCTGGTTAT CCACGGCACC GATGACCCGC TGGTGCCGGT GTCCGGCGGT CGCGCCACGG CCAAGGCCAT CCCCGGGGCG CGCCTGCATC TGGTGCCGGG CATGGGCCAC GATTTTCCGC GCGGCGCCTG GCCGCAGATC GCCGACGCGG TGTCCGAACA CGTGCGCGAC GCCGAGCGAG CGCGCGCCTA G
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Protein sequence | MPKARVGDIE LHYESEGEGL PLVLIMGIGT QLTAWPAGLR AALVERGLRV IRFDNRDIGL SSKLTHLPVP KLRRVLTRTL LGMLQDVPYT LEDMAADTAG LLDALELDSA HILGASMGGM IAQVMALHHP QRMRSLCSVM SHPGNLRSMV ARPKAYRALM SPLPKEHEAA VTHMVGVMRA LSGSGFPFDE DAARAYLDLA IARSVHPQGF LRQFAAIAAA PNRIPALRSL RMPSLVIHGT DDPLVPVSGG RATAKAIPGA RLHLVPGMGH DFPRGAWPQI ADAVSEHVRD AERARA
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