Gene Hoch_3587 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3587 
Symbol 
ID8545977 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4942149 
End bp4943039 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content71% 
IMG OID646388256 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003267982 
Protein GI262196773 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.00848755 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAAAAG CGCGCGTCGG CGATATCGAG CTGCACTACG AGAGCGAGGG CGAGGGGCTG 
CCGCTGGTGC TGATCATGGG CATCGGGACC CAGCTCACGG CCTGGCCCGC GGGCCTGCGC
GCGGCTCTGG TCGAGCGCGG CTTGCGCGTG ATCCGCTTCG ACAACCGCGA CATCGGGCTA
TCGTCGAAGC TCACTCATCT GCCCGTGCCC AAGCTGCGCC GCGTACTCAC GCGCACATTG
CTGGGGATGC TGCAAGATGT CCCGTACACG CTCGAGGACA TGGCCGCCGA TACCGCCGGT
CTGCTCGACG CCCTCGAGCT CGACAGCGCG CACATCCTCG GTGCATCGAT GGGCGGGATG
ATCGCCCAGG TGATGGCGCT CCATCATCCG CAGCGGATGC GCAGCCTGTG CTCGGTGATG
TCGCACCCGG GCAACCTGCG CAGCATGGTC GCGCGGCCCA AGGCGTACCG GGCGCTGATG
TCGCCGCTGC CCAAGGAGCA CGAGGCCGCG GTCACCCACA TGGTCGGCGT GATGCGCGCG
CTCTCGGGCT CGGGCTTCCC CTTCGACGAG GACGCCGCGC GCGCGTATCT CGACCTCGCC
ATCGCCCGCT CGGTGCATCC GCAGGGCTTT CTGCGCCAGT TCGCCGCCAT CGCGGCCGCG
CCCAATCGCA TCCCGGCGCT GCGCTCGCTG CGCATGCCCT CGCTGGTTAT CCACGGCACC
GATGACCCGC TGGTGCCGGT GTCCGGCGGT CGCGCCACGG CCAAGGCCAT CCCCGGGGCG
CGCCTGCATC TGGTGCCGGG CATGGGCCAC GATTTTCCGC GCGGCGCCTG GCCGCAGATC
GCCGACGCGG TGTCCGAACA CGTGCGCGAC GCCGAGCGAG CGCGCGCCTA G
 
Protein sequence
MPKARVGDIE LHYESEGEGL PLVLIMGIGT QLTAWPAGLR AALVERGLRV IRFDNRDIGL 
SSKLTHLPVP KLRRVLTRTL LGMLQDVPYT LEDMAADTAG LLDALELDSA HILGASMGGM
IAQVMALHHP QRMRSLCSVM SHPGNLRSMV ARPKAYRALM SPLPKEHEAA VTHMVGVMRA
LSGSGFPFDE DAARAYLDLA IARSVHPQGF LRQFAAIAAA PNRIPALRSL RMPSLVIHGT
DDPLVPVSGG RATAKAIPGA RLHLVPGMGH DFPRGAWPQI ADAVSEHVRD AERARA