Gene Hoch_3580 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3580 
Symbol 
ID8545970 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4933581 
End bp4934261 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content72% 
IMG OID646388249 
Productglutamine amidotransferase of anthranilate synthase 
Protein accessionYP_003267975 
Protein GI262196766 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0512] Anthranilate/para-aminobenzoate synthases component II 
TIGRFAM ID[TIGR00566] glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.834377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0378393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC TGATCGACAA CTACGACTCG TTCACCTACA ACCTGGCCCA GTACCTGGGG 
CAACTGGGCG CCGATGTCCG CGTGGTCCGC AACGACGCCC TCGGCCTCGA CGACATCGCC
ACCATGGCGC CGACGCACAT CGTGATCTCG CCCGGCCCGT GCACGCCCGA CGAGGCCGGC
ATCTCGGTGG CCACGGTGCG CCGCTTCGCC GGCGAGATTC CCATCCTCGG CGTGTGCCTC
GGCCACCAGT CCATCGCCCA GGCCTTCGGC GGCCGTATCG TGCGCGCCGG CGAGGTCATG
CACGGCAAGC TCTCGCAGGT CTTCCACGAC GACCGCGGCC TGTTCACCGG CGTGCGCAAC
CCCATGCGGG TCACGCGCTA CCACTCGCTG GTGGTGGCGC CCGAGTCGAT CCCCGATTGC
CTCGAGGTCA CGGCGAAGAC CTGGCGCGAC GAGATCATGG GCCTGCGCCA CCGCGGCTAC
GCGGGCACCC ACGCGCCGGT CGAGGGCTTG CAATTCCACC CCGAATCGAT CGAGACCGCC
GCGGGCACGG CGCTGCTGGG CGCGTTCCTG GCCACCGGAC GCGGCAGCGC GGCCGCGGCC
CCGTCCCCGA CCTCATCGAC CTCATCGTCG CCCGCGCTGC CGCTGCCGAC GCCGCCGCCG
CGCTCGACGC CGCTGAGCTG A
 
Protein sequence
MLLLIDNYDS FTYNLAQYLG QLGADVRVVR NDALGLDDIA TMAPTHIVIS PGPCTPDEAG 
ISVATVRRFA GEIPILGVCL GHQSIAQAFG GRIVRAGEVM HGKLSQVFHD DRGLFTGVRN
PMRVTRYHSL VVAPESIPDC LEVTAKTWRD EIMGLRHRGY AGTHAPVEGL QFHPESIETA
AGTALLGAFL ATGRGSAAAA PSPTSSTSSS PALPLPTPPP RSTPLS