| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3570 |
|---|
| Symbol | |
|---|
| ID | 8545960 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | - |
|---|
| Start bp | 4914730 |
|---|
| End bp | 4919169 |
|---|
| Gene Length | 4440 bp |
|---|
| Protein Length | 1479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 646388239 |
|---|
| Product | serine/threonine protein kinase |
|---|
| Protein accession | YP_003267965 |
|---|
| Protein GI | 262196756 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0515] Serine/threonine protein kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0837409 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGGATG ACTCCTCCGA CAGCGTCGAC CTCGCCGTCG ACGAGGATGG CGAGCCGCTG
ACCCAGGCGG CTCGGCCTTC CACCAAGGGG GTGAGCACCC ACGGTCGCGC CGCGTCAGAG
GCCGAGCGCA CGGCTGCGTC CGAGGCGCGC GCCGGCGACG CGCGCGACGG CGCTGGTGGC
GACGGCGACG CCAGCGCCGA GGACGACGCG GGCAAGCCCG GTGACGATCA AGACGCGGGC
GCGGCCGCGG CCGGGAAGCT GCCCGACGCG TACTCGACCT CGCTCTCCGA GCCCGACCAC
GACCACGACG ACGTCTCGCA GGCCACCGCG CTGACCATCA CCACCGCGCC GCCGGCGCGC
ATCTCCTCGG GCAGCCAGCG CACCGCCGTG GGCCTGCCGA CCCTGCCCAG CGCCCGCTTC
ACGCCCGGCA CCCTGCTGGC CGAGCGCTAT CGCATCATCC ACCTGCTGGG CCGCGGCGGC
ATGGGCGAGG TGTATCGCGC CGAGGACCTC AAGCTCGAGC AGCCGGTGGC GCTCAAGTTC
CTGCCCATCA GCGTCGAGCG CGATCCCGAC CGGCTGGCGC GCTTCCTCGA GGAGGTCAAG
ATCGCGCGCG CCATCGCCCA CCCCAACATC TGCCGGGTGT ACGACGTCGG CGAGAGCGAG
AGCCAGCACT TCCTGTCGAT GGAGTACATC GAGGGCGAGA ACCTCACGAC GCTGCTGCGC
CGCATCGGCC GGCTGCCGCG CGCCAAGGCC ATGGAGCTGG GCCAGCAGAT CTGCCACGGC
CTGGCCGCCG TCCACGCCCA GGGCGTGCTG CACCGCGATC TCAAGCCCGC CAATCTGATG
ATCGACGACC GCGGCCGCGC CAAGATCACC GACTTCGGCC TGGCCAGCCT GTCCGAGACC
GTCGAGGCCC ACAACATCAC CGACGGCACG CCCGCGTACA TGGCGCCCGA GCAGCTCGCG
GGCGAGAGCG TCTCGGTGCA CAGCGACCTG TACGCGCTCG GCCTGGTGCT CTACCAGATG
TTCACCGGCC GGCCGGCGTT TCCCGGGCTG TCCTCGCGCG ATCAGATGAT GCAGCGGCTC
GAGACCCGCA TCGAGCCGCC CTCGCGCCTG GTGCCCGATA TCGACCCGAT GGTCGAGAGC
GCTATCCTGC GCTGCCTCGA GGCCGATCCC CACGACCGCC CCGGCGACGC GCTCGAGGTC
GCGGCTGCGC TCACCAGCAG CTCGGTGCCC GCGGCTGACG CGGTGCTCAA GGCCATCCTG
GTGTGTCGCC CGGGCGAGCG CAGCGCCTGG AGCGAGGCGC TCGGCGACGA CCAGGCGGCC
GCGCTGGCGC GCAGCCTGGC CAAGCGCAGC CGCGCGCTGA TGGCCGACTA CGACGGCCTG
GCCCTGGCCG GCACCGGCGG CCAGCAGATG ATCTTCGACC GCCCGGTGCA CGCGGTGCGC
TTCGCCCTCG CCTACCACCA GATGTTCGCC GAGCTGGCTC GCGAGCTGAG CGCCGAGGTG
CACGCGGCCG TGGGCATCCA CCTCGGCGAG GTCACCTTCC GCCACGACTC GGTGCGCGCC
GGCACCGCCC CGGCGCTGTA TCCCAACGTC GACGTCGGCG CCCGCGACAC CGCCGTGCGG
CTGGCGGCCC TGGCGGCCCC GCGCCAGACC CTGCTCACGC GCAGCGCCTT CGACCTGGCC
CGCCAGAGCA TGATCGACAG CGTCGAAGGC GTGCGCTGGC TGGCCCACGG CAGCTATGAG
ATCGAAGGCT TGAGCGAGGC CGCCGATCTC TTCGAGGTCG GCGTCGAGGG TCAGGCGCCG
CTGCGCGCGC CCGCGGAGTC GCCGCGCGGC CGCCCGCAGA TCGTCCAGCG CACGGTGGCC
GGCTGGCGGC CGGCGCCGGG CCTGGAGATG CCCCAGCGCT ACCACTGGGT GATCGAGAAG
AAGCTCAGCG AGGGCGGCTT CGGCGAGGTG TGGCTGGCCC GCCACCGCAA GACCCGCGAG
CCGCGGGTGT TCAAGTTCTG CTACGACGCC ACCAGCCTGC GCGCCCTGCA GCGCGAGATC
GCGCTGTTTC GACTGCTCAA GGAGACCCTG GGCGAGCGCA GCGACATCAA CCGCATCTTC
GACTGGAACT TCGAGGACGC GCCCTACTTC ATCGAGTCGG CCTACACCTC GGGCGGCGAT
CTCATCGCCT GGGCCGCGCA ACAGGGCGGG CTCGAGGAGG TGCCGCTGGC GACCAGGCTC
GAGATCGTGG CCCAGGTGGC CACCGCGCTG GCCGCCGCGC ACTCGGTCGG CGTGCTGCAC
AAGGACGTCA AACCGGCCAA CGTGCTCATG TCCTCGGCCG AGCGCGACGA CGTCCAGATC
AAGCTGGCCG ACTTCGGTAT CGGACACGTG ACCGAAACCC AGCGCCTGGC CGAGGCCGGC
ATCACCATGG TCGGCCTCAC CGAGTTCTAC GAGGACACCC AGCCCTTCGC CGGCGAGGGC
GGCACCCGCC TGTACATGGC GCCCGAGGTC ATCGAGGGCA AGCCGGCCAC GGTGCGCGCC
GATGTCTACG CCCTGGGCGT GATGCTCTAT CAGATGGTCG TCGGCGACTT CTCGCGCGCC
CTGGCCCCGG GCTGGGAGCG CGACGTGAGC GACCCCATCC TGCGCGGCGA TATCGCCGCC
GCGGTCGACG GATCCGAGCA GCAGCGCCTG GGCGACGCCC TGCGCCTGGC CGAGCGCCTG
CGCACCATCG AGCGCCGCCG CGAGAAGCGC GCGGCCGATA TGCGCCAGGC CGCCGACGCG
CGCCAGGCCA AGCTCACGCT CGCGCGCGTG CGCCGCCGCC GCAAGGTCGT CGGCCTGCTG
CTGGTGGTGG TGCTGCTGTT CTCGGGCACG GTGTTCCTGC AGTCGCGGCG CGAGGCCCGC
GAGGCCCGCG CGGCCGAGCA GGTGTCGCAG TTCCTGGTCG AGCTCTTCGA GGTCGCCGAC
CCCTACAAGA AAGAGGGCGC GGCCATCACC GCGCGCCAGA TCCTCGACCG CGGCGCCGCG
CGCATCGAGA CCGAGCTGAG CGATCAGCCC GCCATCCGCG CGCGCCTGAT GCACCTGATG
GGCACGGTGT ACGGCAACCT GGGCCTGTAC GAGGACGCGC AGCGGCTGCT CGAACAGGCG
CTGGCCATCC GCAAGCGCCT GCACGGCCTC AACCACCTCG ACGTGGCCGA GACCCACCAC
GCCCTGGGCA TGGTGTACCT CGACGAGCTG CAGTTCGAGG ACGCCAAGAC GCGCTTCGAA
CAGGCGCTGT CCATCCGCCG CAGCGTGCTC GGCAACGAGC ACCTGGCCGT GGCCGAGAGC
CTCGACGGCC TCGCCAAGGT GTTCAACAGC CTGCGCCGGC CCGACGACGC CGAGCCGCTG
GCGCTGCAGG CGCTCGAGGT GCGGCGCGCG CTGCTGCCCG AGGACGACCC CGATATCGCC
GCCAGCCTGA TGACACTGGG CACCGCGCGC ATGCTTCAAG GCCGCCGCAA CCCGAGCAGC
TACCGCGAGG CCGAGACCTA CCTGCGCGAG GCCATCGACA TGTACCGCGC GCGCCTGGGC
GACCAGGCGC TCGAGGTCGC CGAGGCCATG CACATGCTGG CCAAGATCGT CCTCAACGGG
CGCGGCGACC GGCAGGAGGC CGAGGCGCTG CTGCAGCAGT CCATCGATAT CAAGCGCAAG
CTGCTCGGCG AACAGCACAT CTCGGTGGCT CACAGCCTCA GCTATCAGGC CGAGATCGCC
CGCCGCACCG GCGACCTGGC CCGCGCCGAG TCGCTGTTCG TCAACGCGCT GCTCATCTAC
CGCGCCTCGG TGGAACGTGA GGGCTTGCCC ACCGCCAATC TGCTGCAGAG CCTGGCGCGC
ATCGCGCTCG CGCGCGGCGA CGACGCCCGC GCGGCCAAGC TGGCCAACGA GGGCATCACC
ATCGTCTCCG GCAACGGCCT GGGCGAGCAC GCGGTGTTGC TCGACCTCCT GTCCGACCTC
GGCCAGGCCC TGCAGATGCA AGGACGCGCC GCCGAAGCCG AGCCCTATGT CCGCCAGGCC
GTGGCCATCG GCGAACGCCA GGAGCTGGCA GCGCTCGAGC TGGCCGCGCT GCGCGCCGAC
CTGGTCGATA TCCTGCTCGA GCAGGGCCAG CGCGACGCCG CCGCCGGCCT GATTCCGGGC
CTCGAAGCCG CGCTCGCCGC CCGCTCCGGC GACCCCGACA GCGACGTCAA CGCCCAGCGC
CGATACCATA TCGCCAGCGT GGTGGGCAGC TACCACGCCG GACAGGGCGA CGATAACGCC
GGGGAACAGG CCATGCTCGA CGCACTCGCC GGCCTGCGCG GCGTGCATGT CGACGACCGC
GGCCGCAGAC GCGCCGCGCT GCGCCGCCTG GCCCGCTTCT ATGCCAACTC CGGCCGTCAT
GAAAAGGCCG AGTTGTACCG TCGCCTGCTG CGCGACGACT CCCCGGCTGC GACTCGCTGA
|
|---|
| Protein sequence | MRDDSSDSVD LAVDEDGEPL TQAARPSTKG VSTHGRAASE AERTAASEAR AGDARDGAGG
DGDASAEDDA GKPGDDQDAG AAAAGKLPDA YSTSLSEPDH DHDDVSQATA LTITTAPPAR
ISSGSQRTAV GLPTLPSARF TPGTLLAERY RIIHLLGRGG MGEVYRAEDL KLEQPVALKF
LPISVERDPD RLARFLEEVK IARAIAHPNI CRVYDVGESE SQHFLSMEYI EGENLTTLLR
RIGRLPRAKA MELGQQICHG LAAVHAQGVL HRDLKPANLM IDDRGRAKIT DFGLASLSET
VEAHNITDGT PAYMAPEQLA GESVSVHSDL YALGLVLYQM FTGRPAFPGL SSRDQMMQRL
ETRIEPPSRL VPDIDPMVES AILRCLEADP HDRPGDALEV AAALTSSSVP AADAVLKAIL
VCRPGERSAW SEALGDDQAA ALARSLAKRS RALMADYDGL ALAGTGGQQM IFDRPVHAVR
FALAYHQMFA ELARELSAEV HAAVGIHLGE VTFRHDSVRA GTAPALYPNV DVGARDTAVR
LAALAAPRQT LLTRSAFDLA RQSMIDSVEG VRWLAHGSYE IEGLSEAADL FEVGVEGQAP
LRAPAESPRG RPQIVQRTVA GWRPAPGLEM PQRYHWVIEK KLSEGGFGEV WLARHRKTRE
PRVFKFCYDA TSLRALQREI ALFRLLKETL GERSDINRIF DWNFEDAPYF IESAYTSGGD
LIAWAAQQGG LEEVPLATRL EIVAQVATAL AAAHSVGVLH KDVKPANVLM SSAERDDVQI
KLADFGIGHV TETQRLAEAG ITMVGLTEFY EDTQPFAGEG GTRLYMAPEV IEGKPATVRA
DVYALGVMLY QMVVGDFSRA LAPGWERDVS DPILRGDIAA AVDGSEQQRL GDALRLAERL
RTIERRREKR AADMRQAADA RQAKLTLARV RRRRKVVGLL LVVVLLFSGT VFLQSRREAR
EARAAEQVSQ FLVELFEVAD PYKKEGAAIT ARQILDRGAA RIETELSDQP AIRARLMHLM
GTVYGNLGLY EDAQRLLEQA LAIRKRLHGL NHLDVAETHH ALGMVYLDEL QFEDAKTRFE
QALSIRRSVL GNEHLAVAES LDGLAKVFNS LRRPDDAEPL ALQALEVRRA LLPEDDPDIA
ASLMTLGTAR MLQGRRNPSS YREAETYLRE AIDMYRARLG DQALEVAEAM HMLAKIVLNG
RGDRQEAEAL LQQSIDIKRK LLGEQHISVA HSLSYQAEIA RRTGDLARAE SLFVNALLIY
RASVEREGLP TANLLQSLAR IALARGDDAR AAKLANEGIT IVSGNGLGEH AVLLDLLSDL
GQALQMQGRA AEAEPYVRQA VAIGERQELA ALELAALRAD LVDILLEQGQ RDAAAGLIPG
LEAALAARSG DPDSDVNAQR RYHIASVVGS YHAGQGDDNA GEQAMLDALA GLRGVHVDDR
GRRRAALRRL ARFYANSGRH EKAELYRRLL RDDSPAATR
|
|---|
| |