Gene Hoch_3555 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3555 
Symbol 
ID8545945 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4895488 
End bp4896288 
Gene Length801 bp 
Protein Length266 aa 
Translation table11 
GC content66% 
IMG OID646388224 
Producthypothetical protein 
Protein accessionYP_003267950 
Protein GI262196741 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.170558 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAC TCTTGGGAAT TCTCTGCAAC GACGCCGAGC GCCTGGCGAC GGCGCTCGAG 
CCGGTGCGCG AGCTGCTCCG CGCCGAGCCG CCCATCGCGA GCTGGGGAAT GGGCTACGCC
CAGGGCGGCG AGGTTCTGCT CAGCCAGAAC CCGCGCCCCA GCGACGAGCC CGTGGATTTC
GGCCACGCGG TGAGCACGCT GCGCACCGAC TGCGCCCTCC TCCACGCCTC GGGCGCCGAC
GAGCACGACG GCCAGCCCGT CCTGCAACCC TTCCGCTACC GGCAGTGGAT GTATGCTCAA
GAGGGGGGAA TGCTTACATC GGTGGAGCAG CGTGCGGCCC TCTCCGAGCA GGTCCCGGAT
TTCTTGCAGC GCAACATTCG CAGCAGGAGC ACCAGCGAGT TGCTGTTCTA CCTGTATCTC
ACTCAGCTCC ATCGCGTCGG CAGCCTCGAG GACCCTCATC TCGCCCCCAA TCGGGCCAGG
GAGATCTTTG AAACCGCATT CATCGAGGTC CAGGAGCGCC TGGGTGATGT CCTCGTGGGC
CACCCGCTGG GCAGCGCGCT GCTCAGCAAC GGGCACTCGG CGGTGGCCTT TACCTTCGAT
AAAAGCATGT ATATTCGGCG CCTTATGATC TCGAGTGCAC GCGCCGGACG CGACGAATCG
TTTCGCGGCG TACTGCTTCT CAGCGCGGAG AGTTGTCCGG GGGAGGGCTT CGAAGAGCTG
CCGCCGCGCA GCGCCATTTG CATCAGCCGT TCGCTCGACA CGGACATCGC ACCGCTGGAC
GGGTTGCGCC CGATCACCTG A
 
Protein sequence
MTRLLGILCN DAERLATALE PVRELLRAEP PIASWGMGYA QGGEVLLSQN PRPSDEPVDF 
GHAVSTLRTD CALLHASGAD EHDGQPVLQP FRYRQWMYAQ EGGMLTSVEQ RAALSEQVPD
FLQRNIRSRS TSELLFYLYL TQLHRVGSLE DPHLAPNRAR EIFETAFIEV QERLGDVLVG
HPLGSALLSN GHSAVAFTFD KSMYIRRLMI SSARAGRDES FRGVLLLSAE SCPGEGFEEL
PPRSAICISR SLDTDIAPLD GLRPIT