| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3544 |
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| Symbol | |
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| ID | 8545934 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | + |
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| Start bp | 4878380 |
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| End bp | 4879555 |
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| Gene Length | 1176 bp |
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| Protein Length | 391 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 646388213 |
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| Product | tRNA(5-methylaminomethyl-2-thiouridylate)- methyl transferase |
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| Protein accession | YP_003267939 |
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| Protein GI | 262196730 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0743711 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.232019 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAGCAC AGAGCCTCAT CGTCGCCGCG CTCTCGGGCG GCGTGGACAG CGCGGTCACC
GCTGCCATGT TGGTCGAGCA GGGCCACCGC GTGGTCGGCA TGACCATGCG CCTCTACGAC
GCCAGCGGCA CCAGCGCATC GGTCGGCGGT CGCTGCTGCG GCCCGCGCGA CATCGAAGAC
GCGCGCCGGG TGTGCGCCCA CCTCGGCATC CCGTTCTACG TGGTCAACTT CGAGGTCGAC
TTCGCGCACA CGGTCATCGA CGATTTCGTC GACACCTACC TGGCGGGCGA GACGCCCAAC
CCCTGCGTAA AGTGCAACCA ACACATCAAG TTTACCCCGC TACTCGCGCG AGCGCGCGCG
CTCGGCGCCG AGACCGTGGC CACCGGGCAC TACGCGCGCC TGGAGGACAC GGGCGCGGGA
ATTCGCCTCC GCCGCGGCCG CGACGCGAGC AAGGATCAGT CGTACTTCCT GTTCTCGATG
CCGCGCGAGG AGCTGGCCTC GGTGCGCTTC CCCCTGGGCG CGATGACCAA AGACGAGGTC
CGCGACAAGG CCCGCGCCTA CGGTCTGCCC AACGCGGCCA AGGCCGACTC GCAGGAGATC
TGCTTCGTGC CCGACGGCGA CTACGCGGGC TTCGTCGAGG CCGAGGCGCT GCGCCGTTCG
CGCCCGGTGC CGGCGAGCGG CGACATCGTC GATGGCGAGG GCCAGGTGCT CGGCCGCCAC
CGGGGCGTAC ATCACTACAC CATCGGCCAG CGCCGTGGCC TCGGCAACCT GCGCACGCAG
ACGCGCTCGC CGACGCCGCT CTACGTCATC GGCGTCGACC GCGCGCGCGA CCGCGTGGTC
GTGGGGCCGC GCGAGCAGGC CGCGCGCCGC TCGGTGCCGG TGCGCGACGT GCGCTGGCTG
AGCACGCCGC CGGCCGAGGG TCGGCTCAGC GCCGGTGTGC AGGTGCGCTA TCGCTCCTCG
CCGCTGCCGG CCACGCTCGA GCTGTGCGGC GAGGGCGACG AGCGCGGCAA GCGCGTGCGC
GTGCACTTCG ACGACGCCGC GGTCATCGCC TCGCCCGGAC AGGCGGCGGT GTTCTACGAT
GGCGACACCG TGCTCGGCGG CGGCTGGATC GCGCGCGACG AGCAGCCGCT GAGCGAGACG
CAGCCGCCGG CCGATCGCTC GCAGCCGGCG ATTTGA
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| Protein sequence | MAAQSLIVAA LSGGVDSAVT AAMLVEQGHR VVGMTMRLYD ASGTSASVGG RCCGPRDIED
ARRVCAHLGI PFYVVNFEVD FAHTVIDDFV DTYLAGETPN PCVKCNQHIK FTPLLARARA
LGAETVATGH YARLEDTGAG IRLRRGRDAS KDQSYFLFSM PREELASVRF PLGAMTKDEV
RDKARAYGLP NAAKADSQEI CFVPDGDYAG FVEAEALRRS RPVPASGDIV DGEGQVLGRH
RGVHHYTIGQ RRGLGNLRTQ TRSPTPLYVI GVDRARDRVV VGPREQAARR SVPVRDVRWL
STPPAEGRLS AGVQVRYRSS PLPATLELCG EGDERGKRVR VHFDDAAVIA SPGQAAVFYD
GDTVLGGGWI ARDEQPLSET QPPADRSQPA I
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