Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Hoch_3519 |
Symbol | |
ID | 8545908 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Haliangium ochraceum DSM 14365 |
Kingdom | Bacteria |
Replicon accession | NC_013440 |
Strand | - |
Start bp | 4852696 |
End bp | 4853946 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 646388187 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003267914 |
Protein GI | 262196705 |
COG category | [V] Defense mechanisms |
COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.225235 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.132299 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTCGACC TCGACGGCTG GCAGGAGATC CTCAGCACGC TGCGCAGGAA CAAGCTGCGC ACCGTGCTCA CGGCCGTCGG CGTGCTGTGG GGCATCTTCA TCCTCATCGT CATGCTGGGC GCGGGCAACG GCCTGGAGAA CGGCGTGAAC AGCAGCATGA GCGGCTTCGC GCGCAACGCC GTGTTCGTCT GGGGGCAGCG CACCAGCCTG CCCTACGCCG GGCTCAAGCC GGGCCGCCGG GTGCGCTTCA ACAACGGCGA TGTCGACGCC CTGCGCGCCG GTGTCCCCGC CATCGCCCAC CTGGCGCCGC GCAACCAGAT GGGCGGCTTC CGCGCCGGCT CGCTGGTGCG CCGCGGCACC AAGACCGGCA GCTTCACGGT CAGCGGCGAC TACCCGGCGA TTCAGCACAT CCAGCCCATC CGCTTGCTCG AGGGCCGCTT CCTCAACCAG CTCGATATCG ACGAGCGCCG CAAGGTGGCC GTGATCGGAC GACCGGTCAA AGAACAGCTC TTCGCGGCCG AGGAGCCGGC CGTGGGCGAC GCCATCGCCG CCGGCGGCGT GTACTTTCAG GTCATCGGCG TGTTCGAGTC GCCGCAGGGC GGCGAGCGCG GCGAGCGCCA GGCGCAGGTG GTGCACGTGC CCTTCACGAC CTTCCAGCAG GCCTTTCACC AGGGCGATCA GGTCGGCTTC TTCGCCCTCA CCGCCGACCC CAGCGTCGGC GCCGCCGAGA TCGAGACCCA GATCAAAACC GTGCTGGCCG GCCGCCACCG CATCGCGCCC GCCGACCTGC AGGCCATCGG CACCTACAAC GCCCAGGAAG ACTTTCAGAA GATGCAGAAC CTGTTCACCG GCGTGCGCAG CATCATCTGG TTCTCGGGCG TGATGACCCT GCTCGCCGGC GTCATCGGCG TGGTCAATAT CATGCTCATC TCGGTCAAGG AGCGCACCCG CGAGATCGGC GTGCGCAAGG CCCTGGGCGC CACCCAGCGC TCGATCGTGG CCATGATCCT GCGCGAGTCG GTGCTGCTCA CCAGCCTCGC CGGCTGCTTC GGCATCCTCG CCGGCGTGGC CGTGATCGAG CTGCTCGCCG ACCCGAGCTT TGCCAGCGAC ACCTTCCAGG CGCCGACCGT GAGCTTTCCG GCCACGGTGG CCGCGACCAT CATCCTCATC ATCGCCGGCG GACTGGCCGG GATTTTACCG GCGCGCCACG CCGCCAGCAT CGACCCGGTG CGCGCGCTCA GAGCGGAGTA A
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Protein sequence | MFDLDGWQEI LSTLRRNKLR TVLTAVGVLW GIFILIVMLG AGNGLENGVN SSMSGFARNA VFVWGQRTSL PYAGLKPGRR VRFNNGDVDA LRAGVPAIAH LAPRNQMGGF RAGSLVRRGT KTGSFTVSGD YPAIQHIQPI RLLEGRFLNQ LDIDERRKVA VIGRPVKEQL FAAEEPAVGD AIAAGGVYFQ VIGVFESPQG GERGERQAQV VHVPFTTFQQ AFHQGDQVGF FALTADPSVG AAEIETQIKT VLAGRHRIAP ADLQAIGTYN AQEDFQKMQN LFTGVRSIIW FSGVMTLLAG VIGVVNIMLI SVKERTREIG VRKALGATQR SIVAMILRES VLLTSLAGCF GILAGVAVIE LLADPSFASD TFQAPTVSFP ATVAATIILI IAGGLAGILP ARHAASIDPV RALRAE
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