| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3518 |
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| Symbol | |
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| ID | 8545907 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4851554 |
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| End bp | 4852693 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 646388186 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003267913 |
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| Protein GI | 262196704 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.224234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.212959 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCT TTCTCCCGGT GATCATCTTG CTGTGCACGC TCGGCGTCTT CGCCGGCACG
CTGCTGTTCC TGTATCAGAA GTCGCAGCGC AAGCCGGTGG TGTTCGCGAC CGAGACCCCG
GTGGTCGCCG ACATCGTCAA GAAGACCGTG GCCACCGGCT CGCTGGTGCC GCGCCAGGAG
ATCGCCATCA AGCCGCGGGT GAGCGGCGTC ATCGCCAAGC TGCACGTCGA GCCCGGCCAG
ATCATCGAGC GCGACGCGCT GCTGGCCGAC ATCCGCATCA TCCCCAACGT GCTCGACCTC
AACCGCGCCG AGTCGGCGGT GCAGAGCGCG CGCATCGAGC TCGACAACGC CCAGCGCGAG
CTCGATCGCA GCCGCTCGCT GTCGCAGCGC CAGGTGCTCT CGAGCGCCGA GCTCGACCGC
GTGCAGTACC AGCACCAGCT CAAGAAACAG GCCCTGCAGG CGGCGCAGAG CAACCTCGCG
CTGATCAAAA ACGGCGCCCT GCGGAAGTCG GACAAGGTGT CGAACCAGGT CCGCTCGACC
GTGGCTGGCA CGGTCCTCGA CGTGCCGGTC GAAGAAGGCG AGTCGGTCAT CGAGAGCAAC
ACCTTCAACG AGGGCACCAC CGTGGCCACG GTCGCCGACA TGAGCGACAT GATCTTCGAG
GGCCGGGTCG ATGAGTCCGA GGTCGGCAAG CTGCGCGAGG GCATGGAGCT GGCCATCAAG
GTCGGCGCCA TCGAGGGCGC GCTGCTCAGC GGCACGCTCG AGTACATCGC GCCCAAGGGC
GTCGAGACCG AGGGCGTCAT CGAGTTCGAG ATCCGGGCCG CGATCGAGCC GCGCGAGGAT
CTCGTGGTGC GCGCAGGCTA CAGCGCCAAC GCCGACATCG TGCTCGAGCG GCGCGCGCAG
GTCATGGCCA TCAACGAGGG CCTGCTGCAG TTCGAGGACG GCGAGCCCTA CGTCGAGATC
GAGACCGCGC CGCAGACCTT CGAGCGCCGC TCGGTCGAGG TCGGTCTCTC GGACGGCATC
CTGATCGAAG TGCGCGCCGG CCTCGACGCC GCGACCAAGA TCAAGAACCC CAACGAGGCC
GCCGGCGCCA TGGGCGACAA AGGAATGGGC GCGCAAGGGC GACGGGGCAG CGGCGCCTGA
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| Protein sequence | MKRFLPVIIL LCTLGVFAGT LLFLYQKSQR KPVVFATETP VVADIVKKTV ATGSLVPRQE
IAIKPRVSGV IAKLHVEPGQ IIERDALLAD IRIIPNVLDL NRAESAVQSA RIELDNAQRE
LDRSRSLSQR QVLSSAELDR VQYQHQLKKQ ALQAAQSNLA LIKNGALRKS DKVSNQVRST
VAGTVLDVPV EEGESVIESN TFNEGTTVAT VADMSDMIFE GRVDESEVGK LREGMELAIK
VGAIEGALLS GTLEYIAPKG VETEGVIEFE IRAAIEPRED LVVRAGYSAN ADIVLERRAQ
VMAINEGLLQ FEDGEPYVEI ETAPQTFERR SVEVGLSDGI LIEVRAGLDA ATKIKNPNEA
AGAMGDKGMG AQGRRGSGA
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