Gene Hoch_3517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3517 
Symbol 
ID8545906 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4850014 
End bp4851540 
Gene Length1527 bp 
Protein Length508 aa 
Translation table11 
GC content74% 
IMG OID646388185 
ProductPpx/GppA phosphatase 
Protein accessionYP_003267912 
Protein GI262196703 
COG category[F] Nucleotide transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0248] Exopolyphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.380715 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.228242 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGAC TTGGCGCCAT CGACGCGGGG ACCAACGCCA TCCGCGCGGT CATCGCCGAC 
GCGAGCGATC CGCGCGCGCT CACCCTGGTC GAGCATCTGC GCCTGCCGGT GCGCCTCGGC
CGCGGCACCT TCACGCGCGG CGAGATCGAC GCCGCGATGC TGTCCGAGGC GGTCGACGGG
TTCGAGCGCT TCGCCGAGCT GTTCGAGCAG CACGGCGTCG AGCGCTACCG GGCGGTCGCC
ACCAGCGCGG TGCGCACCGC CCACAACCGC GACGCCCTCC TGCACCGCAT CTACCACGAG
GCCGGGATCG ATCTCGAGGT CATCGACGGC GAGGAGGAGG CCCGGCTGGT GCGCAAGGCC
GTGGTCCACG CCTTTGCCGA GCGCCCGCCG CCGCGCATGG TGCTCGATCT CGGCGGCGGC
AGCCTCGAGG TCAACTACCA CGACGGCGCC TCCTGGCGCG GGGTGTCGCT GCCCGTGGGC
ACGGTGCGCC TGCTCGAGAC CTTCGGCCTC ACCGGCGTCA TCGGCGCCGA CGAGGCCGGC
ATGGTGCGGC GCTACGCGGG CACCTTGCTG CAGGCCTTCG CCCCGCCCGT GGGCCGCACC
CCGGCGGCCG TGTGCGGCGG CAACGCCGAG GCCCTGGCGC GTTTGTTCGG CGACACCGAC
GCCACCGGCA TGCCGGGCTT CGACCTGGGC GCGCTCGAGG CCGCCCTGCC CGAGCTGCTC
GCCGGCGACG TCGACACCCG CATGCAGCGC TTTGGCCTGC GCCGCGACCG CGCCGAGGTC
ATCGGCGTGG CCGCCCTGGT GCTGGCCACC GTGTGCCGCG CGCTGCAGCT CACGCGCCTG
GCCGTGCCCG GGGTCGGCAT CCGCGACGCG CTGTTGCTCG ACCTCGCCGA GGGCATCGCC
GACGAGCAGG CCGAGGTCGA AAAAGCCCGC GGCAAAGCCC TGCTCACGGC CGCGCGCACC
TTCGCCGGCC GCATGGGCCA CGACATCGCC CACGGCGAGC AGGTGCGCCG GATGGCGCGC
ACCCTCTTCG ACCAACTGGG CGATCTCCAC CGCCTGCCCG AGGAGCTCGG CAGCGTGCTC
GAAGTCGCCG CCGTGCTGCA CGATGTCGGC GAGGTGCTCA ACGCCCGCAG CCACCACAAG
CACTCGGCGT ACATGATCCT GTGGGGCCGC ATCCCGGGGC TCGAGAGCCC GCATCGCGAG
ATGGTCGCGG CGCTGGCGCG CACCCATCGC AAGTCGCCGC CCGACCCCAA GAAGCACGAG
ATCTACGCCC AGCTCACCAA GCCGCAGCGC GCCCAGGTGC GCACGCTCGG CGCCATCCTG
CGCGTGGCCG ACGCCCTCGA CACCGATCAC CGGCAGAGCG TGGCCCGCGT GCTGGTCACC
CGCCTGGGCA AGGATATCGC CCTCGACCTG GTGCTGCATC CGGGCCGGAG CGCACCCGAG
CCGGCCACCC TGCTGCGCAA ATCGGCCCTG TTCGAGGCGG AATTCGGACA CCGCGTGACC
CTCACCGTCG GCCCGCCGCC GACCTGA
 
Protein sequence
MTRLGAIDAG TNAIRAVIAD ASDPRALTLV EHLRLPVRLG RGTFTRGEID AAMLSEAVDG 
FERFAELFEQ HGVERYRAVA TSAVRTAHNR DALLHRIYHE AGIDLEVIDG EEEARLVRKA
VVHAFAERPP PRMVLDLGGG SLEVNYHDGA SWRGVSLPVG TVRLLETFGL TGVIGADEAG
MVRRYAGTLL QAFAPPVGRT PAAVCGGNAE ALARLFGDTD ATGMPGFDLG ALEAALPELL
AGDVDTRMQR FGLRRDRAEV IGVAALVLAT VCRALQLTRL AVPGVGIRDA LLLDLAEGIA
DEQAEVEKAR GKALLTAART FAGRMGHDIA HGEQVRRMAR TLFDQLGDLH RLPEELGSVL
EVAAVLHDVG EVLNARSHHK HSAYMILWGR IPGLESPHRE MVAALARTHR KSPPDPKKHE
IYAQLTKPQR AQVRTLGAIL RVADALDTDH RQSVARVLVT RLGKDIALDL VLHPGRSAPE
PATLLRKSAL FEAEFGHRVT LTVGPPPT