| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3516 |
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| Symbol | |
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| ID | 8545905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haliangium ochraceum DSM 14365 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013440 |
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| Strand | - |
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| Start bp | 4847920 |
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| End bp | 4849764 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 646388184 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_003267911 |
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| Protein GI | 262196702 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.166046 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGGAGG CGGTGTTGGC GGCGAGCGAG TCGACGCTGC TCGTGGTCGA CGCCGGCGGG
TTCATCGTCC AGGTGGCCGC CACCGAGGAT CGCAGCGCGT GGCTCGGCAC CGGGCTCGCC
GACTGGCTGC ACGCCACCGG CCACGAGTCG CTGCAGCGGC ATCTCGAGCG CGCGGTCCGG
CAGCGCGAGG CGTCGTGGTT CGAGGCCCGC GCCCTGCCCG AGCTGGCCGC GGTCGAGTGG
TACCGCATCG CGCTGCGGCC GCTCGAGGAC GGGCGCGCGC TCGCGGTCTT GCAGTCCATC
GATCGCGAGC GCCGCGTGCG CATCGAGAGC CAGCGCTTTC GCGCCATCCT CGACCAGACC
GAGGAGGCCA TCTTCGTCGT CGATCCCCGC AGCGCGCGCT TCGTCGAGGT CAACCCGACC
GCGTGCACCA TGCTGCGCTA CACGCGCGAG GAGATCTTGG CGCTGGGGCC GCAGGACATC
GAGCTCGATT TCCCGCTGCA CACGCGTGAG CAGTGGGCCG ATTTCATGAT CGAGGTGATG
GCCGTGGGCT CGCTGCCCTA CGAGGGCGTG CACCGGCGCA AAGACGGCAG CACCTACCCG
GTCGAGACCC TGTGGAGCAT CAAGACCTTC GAGGGCGATG AGTATCTGCT CGGCGTCGGC
CGCGACGTCA CCGAGCAGCG CCGCATCGAG CTCGAGCTGC GCCAGGCCGA GGAGAGCATG
CGGGTGAGCG ACCGGCTCAC CACCGTGGGC ACGCTGGCGG CCGGCATCGT GCACGAGATC
AACAACCCCC TGGCCTACGT CATGGGCAAC CTCGAGTTCC TCATCGAGCA GGTCGAGGAG
TGGAGCGAGG GCGTCGCCGA CGAGTACCGC AGCGAGCTGT TGCCGGCGCT GCGCGAGGCC
CGCAGCGGCG CCGTGCGCAT GGACCGCATC GTCCGCGACC TGCGCACCTT CTCGCGCCGC
GACGAGGACA GCGTGAGCGC GGTGTCGCTG TCGCAGGTGC TCGACTCGTC GATCAATATC
GCCATGAACG AGATCCGCCA GCGCGCCAAG ATCGAGCGCT CCTACGCCCA GGACGTGGCC
GTGCAGGCCA ACGAGTCGCG GCTCGGCCAG GTGTTCCTCA ACCTGCTGAT CAACGCCGCC
CAGGCCATCC CGCGCGGCAA CTCGCAGCAG CACTGCATCA CCGTGCGCAC CGAGTGCCCG
GGCGAGGGCC GCGTCGCCGT CGAGATCAGC GACACCGGCG CCGGCATGAG CCCGCAGGTG
CTCGAGCGCA TCTTCGACCC CTTCTTCACC ACCAAGCCCG TGGGCGTGGG CACCGGGCTG
GGGTTGTCGA TCTGCCGCAG CATCGTCGAA TCGATGGGCG GGCGCATCGA CGTGCGCTCG
GTGCTCGGCG AGGGCACCTG CTTTCGCATC GAGCTGTCCG GGACCACGGC CGCCGTGGCC
GTGAGCGACG AGGCCGAGCG TGCGCCGCGA GCGCGCGGCG GCGGCCGCGT GCTGATCATC
GACGAGGACG AGCTGGCCGC GCGCGCGCTC AGCCGCTGCC TGCAGCCGCA TCGCTGCGTC
ATCGAGGGCG ACGGACAGCG CGGCCTCGCG CGCGTGCTGC TCGACCACTT CGACGCCATC
TTCTGCGAGC TGCGCCTGCC CGACTTCAGC GGCCTCGACC TGTACCGCGC CGTGGCCGAC
GAGCGGCCAC AGCTCTTGCC CAAGCTGGTG CTGATCCACG GCGGACCGCT CGATCCCGAG
TGCGAGGCCT TTCTCAGCGA GCGCGAGCTG GCGTGCATCA CCAAGCCCTT CGACGCTCAG
CTCGCGCGCC AGTGCGTCGA GCAGCGCCTG GCCGACGACG ACTGA
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| Protein sequence | MLEAVLAASE STLLVVDAGG FIVQVAATED RSAWLGTGLA DWLHATGHES LQRHLERAVR
QREASWFEAR ALPELAAVEW YRIALRPLED GRALAVLQSI DRERRVRIES QRFRAILDQT
EEAIFVVDPR SARFVEVNPT ACTMLRYTRE EILALGPQDI ELDFPLHTRE QWADFMIEVM
AVGSLPYEGV HRRKDGSTYP VETLWSIKTF EGDEYLLGVG RDVTEQRRIE LELRQAEESM
RVSDRLTTVG TLAAGIVHEI NNPLAYVMGN LEFLIEQVEE WSEGVADEYR SELLPALREA
RSGAVRMDRI VRDLRTFSRR DEDSVSAVSL SQVLDSSINI AMNEIRQRAK IERSYAQDVA
VQANESRLGQ VFLNLLINAA QAIPRGNSQQ HCITVRTECP GEGRVAVEIS DTGAGMSPQV
LERIFDPFFT TKPVGVGTGL GLSICRSIVE SMGGRIDVRS VLGEGTCFRI ELSGTTAAVA
VSDEAERAPR ARGGGRVLII DEDELAARAL SRCLQPHRCV IEGDGQRGLA RVLLDHFDAI
FCELRLPDFS GLDLYRAVAD ERPQLLPKLV LIHGGPLDPE CEAFLSEREL ACITKPFDAQ
LARQCVEQRL ADDD
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