Gene Hoch_3504 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3504 
Symbol 
ID8545893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4831188 
End bp4832045 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content75% 
IMG OID646388172 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_003267899 
Protein GI262196690 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.45027 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCGTCG TGACCCTCAA CCTGTGGGGC ACCACGCCGC CGCTGGCGAC CCGCCTGGCG 
CTGGCCGCCG AGCAACTGCG CGCGCTCGCG GTCGACGTGG TCGCGCTGCA AGAGGTGCGG
CACGCCGGCG ATGGCCGCAC CACGGCCGCC CACCTGGCCG AGGCCCTGGG CTTTCAGCAT
CACTACGCCG CGGCCGTGCG CTGGACGGCC GAGGACTGGC CCGAGGACGT GCCCGGCGCC
GGCGCGGGCG AGGAGGGCCT CGCGATCTTG TCGCGTCACG GCCTGGCCGA GTGCCGGGCG
TTGGCGCTGC CCGAGGCGCG GCCGACGGAG GCGCGCATTC TGCTCTCGGC CGCGATCGAT
GCGCCGGCCG GGCGCTGCTG GGTGCACACC ACGCACCTTC ACTACGCGCT CGACGACGGG
CTCGCGCGCG AGCGTCAGGT GCTGGCGATA GACCACGCGC TGCGGGCGTG CGCGGCCGAG
GAGCCGGCGG CCGTGCACAT CCTCTGCGGC GACTTCAACG CCGAGCCGGA CAGCGACGAG
ATGCGCTTTC TGCGCGGGCT GTGCACGCTC GCGGGGCGGC GCAGCTATTT TCAGGACGCC
TTCGCCCACC GGCACCCGGG CGAAGACGGC GTCACCTGGT GCACCGAGCG CGGCGCGGCC
CGGGCCCGGC GCTCGATGGA CCGCGATCGC CGGCTCGACT ACATCTACGT GAGCAAGCGC
CAGCGCGACG GCCGCGGCAC CGTGCGCGAG GCGCGCGTGG TGCTCGGCGG GCGCAGCGGC
GAGGTCGCGG CCTCGGATCA TTACGGCGTG CTGGCCGATG TGCAGATCGC GCCCGCGCCC
GCCTTGGGGC AGAGCTGA
 
Protein sequence
MRVVTLNLWG TTPPLATRLA LAAEQLRALA VDVVALQEVR HAGDGRTTAA HLAEALGFQH 
HYAAAVRWTA EDWPEDVPGA GAGEEGLAIL SRHGLAECRA LALPEARPTE ARILLSAAID
APAGRCWVHT THLHYALDDG LARERQVLAI DHALRACAAE EPAAVHILCG DFNAEPDSDE
MRFLRGLCTL AGRRSYFQDA FAHRHPGEDG VTWCTERGAA RARRSMDRDR RLDYIYVSKR
QRDGRGTVRE ARVVLGGRSG EVAASDHYGV LADVQIAPAP ALGQS