Gene Hoch_3501 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3501 
Symbol 
ID8545890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4829695 
End bp4830252 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content70% 
IMG OID646388169 
Producttype IV pilus assembly PilZ 
Protein accessionYP_003267896 
Protein GI262196687 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.424652 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACATG GCGGGCTTTT CTGCCCGACG ACCAGCCCTC TCGAGGAAGG CGACGCGGTC 
ATCATCGAGC TGAGCGTCCC CGCACTTCCC AACAAGGTGC TCATCCGCGG CACGGTGCGC
TCGTGGCGCC CCGCGCTGCC GCGTCTGCGC GTACGCGCCG GCGCCATGGT CGAGTTCGCC
CCGGAAGAGG AACAAAAGCG CTCTTTCATC GTCGAGACCG TCTCGGGCAC CCGCAGCCCG
ACCACGCGGC GCAAGCACAC GCGCCTGCCG GTCTCGATCC CGGTGCGCTA CCGCACCGCC
AACGAGGCCA ACTTCCACGA CACCACGCTC ATCGAGATCA GCGTCGGCGG CGCCATGCTG
GCCACCGAGG CGCCGATCCC GCTCGACACC GACGTGATCG TCGAGATCAC GCCGCCGGGC
GCGGTCAGCC CGCTGTCGAT CTCGGGCAAG GCCGCGTACC ACAACGCCAC CGGCGGCACC
GGTGTGAAGT TCATGTACCG CGACAGCGGT GGCTCGCGGC GGCTGCGCGA ACTGGTTCGG
CGCCTGCGGC AGTCGTGA
 
Protein sequence
MPHGGLFCPT TSPLEEGDAV IIELSVPALP NKVLIRGTVR SWRPALPRLR VRAGAMVEFA 
PEEEQKRSFI VETVSGTRSP TTRRKHTRLP VSIPVRYRTA NEANFHDTTL IEISVGGAML
ATEAPIPLDT DVIVEITPPG AVSPLSISGK AAYHNATGGT GVKFMYRDSG GSRRLRELVR
RLRQS