Gene Hoch_3499 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagHoch_3499 
Symbol 
ID8545888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameHaliangium ochraceum DSM 14365 
KingdomBacteria 
Replicon accessionNC_013440 
Strand
Start bp4826707 
End bp4827705 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content73% 
IMG OID646388167 
Producthypothetical protein 
Protein accessionYP_003267894 
Protein GI262196685 
COG category[I] Lipid transport and metabolism 
COG ID[COG2267] Lysophospholipase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.134927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.327167 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCGCG CGCGCCCCGT GCTGCTGGGG ATCGGCGCGG GCCTGGCCGC GCTGCTGCTG 
GTGTATGTGC TGGGGCCTCG CGTCGGGGTC GATGCGGCGC GGCTCGAGGC GCTGCGCGCG
CCCGCGCTGC CGAGCGAGCC GAGCCAGATC GACGCCTATC TGGCCGAGAG CGAGCGCGGC
TTCCCCGACA TCCGCCCGGG TCACGAAAAG CTCGTGGTCT GGGCCGCGCC CGCGGCGCCC
GCGCGCACCG AGTGGGCGAT CGTGTACCTG CACGGTTTTT CGGCCTCGCG CGGCGAGATC
GACCCGGTGT GTGCGCGGGT GGCCGAGCGC CTGGGCGCCA ACGTGTTCTA CACGCGGCTG
CGCGGCCACG GGCGCTCGGG GGCGGCCATG GCCGAGGCCG AGGCCGTCGA TTGGTTCGCC
GACGCGCTCG AGGCCCTGGC CGTGGGCCAG CGCATCGGCC GCCGCGTGGT CGTCGTCGGC
ACCTCCACGG GCGCCACCCT GGCGGCGTGG CTGGCCACCC GCGACGAGGC CGAGGACGTC
GCCGCCTTTG TCATGGTGTC GCCCAATTTT CGCGTCGCCA ATCCCTTCGC CGGGCTGATG
CTGGGGCCCT GGGGACCGCA GATCATGCGC CTGGTGCTGG GCCCCGAGAA CCACTTCGAG
CCGGAGAACG AGCTGCACGC CCGCTTCTGG ACCACGCGCT ACCCCTCGTC GGCGCTGATG
CCCATGATGG AGGTCGTCCA GGTGGCCGAA AACATCGAGC TCGGCGCGCT CGAGCAGCCG
CTCCTGCTGC TGCACGCCAG CGGCGACGTG GTGGTCGACA GCGCGACCGC GGCCGAGCGC
TTCGCGGAGT GGGGCGCGCC GGGCAAGCGG CGCGTGCTCA TCGAGGATTC GCGCAATCCC
TCGCAGCACG TGATCGCGGG CGACGCGCTC TCGCCCGAGA CCACGGACGC GGTGGTCGAG
CACATCGTCG AGTTCGTGCG CGGACGCTCT GTGCGCTGA
 
Protein sequence
MPRARPVLLG IGAGLAALLL VYVLGPRVGV DAARLEALRA PALPSEPSQI DAYLAESERG 
FPDIRPGHEK LVVWAAPAAP ARTEWAIVYL HGFSASRGEI DPVCARVAER LGANVFYTRL
RGHGRSGAAM AEAEAVDWFA DALEALAVGQ RIGRRVVVVG TSTGATLAAW LATRDEAEDV
AAFVMVSPNF RVANPFAGLM LGPWGPQIMR LVLGPENHFE PENELHARFW TTRYPSSALM
PMMEVVQVAE NIELGALEQP LLLLHASGDV VVDSATAAER FAEWGAPGKR RVLIEDSRNP
SQHVIAGDAL SPETTDAVVE HIVEFVRGRS VR