| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Hoch_3479 |
|---|
| Symbol | |
|---|
| ID | 8545868 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Haliangium ochraceum DSM 14365 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013440 |
|---|
| Strand | + |
|---|
| Start bp | 4806723 |
|---|
| End bp | 4807949 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 646388147 |
|---|
| Product | 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| Protein accession | YP_003267874 |
|---|
| Protein GI | 262196665 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| TIGRFAM ID | [TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0133862 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.158995 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAGCG CCATTGAACG CGTGCTCCGC GCGCTCGACG ACATCCGCGA CGGCAAGATG
GTCATCCTCG TGGACGACGA GGACCGCGAG AACGAGGGCG ATTTGACCAT GGCCGCCGAG
GCCGTGACCC CCGAGGCCAT CAACTTCATG GCCCGCTACG GCCGCGGCCT CATCTGCCTC
ACGCTCGAAG AGCGGCAGAT CCGCCAGCTC AAGCTGCCGA TGATGGTGTC CGAAAACCAG
GCCACGCTCG AGACCGCCTT CACGGTCTCG GTCGAGGCCC GCCACGGCGT CACCACCGGC
ATCTCGGCCA GCGACCGCGC GACCACGATC CGGGCCGCGA TCGCGGCCGA CGCCCGGCCC
GAGGATCTGG TCTCGCCCGG CCACATATTC CCGCTCAAGG CGCGGCCCGG CGGCGTGCTG
GTGCGCACCG GGCAGACCGA GGGCTCGGTG GATCTGGCGC GTCTGGCCGG GCTCAAGCCC
GCGGGCGTGA TCTGCGAGAT CATGCGCGAC GACGGCGAGA TGGCGCGCAT GCCCGATCTC
GAGCGCTTCA GCGAAGAGCA CGGCGTGGCC ATCGTCAGCA TCGCCGATAT CATCGCCTAC
CGCCTACAGC GCGAGCGCAT CGTCCGCTGT CTGACCAGCG GGCCCATGCG GCCGGCCTTC
CTGGGCCCAG GCGAGCCCTT CCAGTGCGCG ATCTACGGCG CCCAGGTCGA GGACACCGAG
TACATGGCGC TGGTGCGCGG CGACGTGGCC GCGGCCGGCG CGGCCGATGA GGCGGTGCTG
GTGCGCGTGC AGTCGGTGAG CCCGGTGGGC GACACCTTCG GCGTCAAGCC CGAGCTGGCG
GCCGCGCTGC GCACCATCGA CGACGCCGGC GTGGGCGTGT GCCTGTACGT GTACAACAAG
GCGCGCAGCA GCCTCGAGCA CGACTTCCGC AAGCATGCCC TGCGCGAGGC GATCGAGCCG
CCGGCGGGCG GCGGCGCGCA CAGCGAGACC CTGCGCGATT TCGGTCTGGG CGCCCAGGTG
CTGGCCGATC TCGGCTGCCA CAAGGTGCGC CTGCTCAGCA ACTCGAGCCG GCGCATCGCC
GGTATCGAGG GCTTCGGCAT CGAGGTCGTC GAGCGCGTGG CCATCGACAT CGACGGCGAG
GGCGCGAGCC CGCGGCCGAC GCTGCGTTCG TTGCCGAGCA GCGAGCCGAG CTCCGGCGAG
TCGGCGACCG GCGGCGACGA GACTTGA
|
|---|
| Protein sequence | MKSAIERVLR ALDDIRDGKM VILVDDEDRE NEGDLTMAAE AVTPEAINFM ARYGRGLICL
TLEERQIRQL KLPMMVSENQ ATLETAFTVS VEARHGVTTG ISASDRATTI RAAIAADARP
EDLVSPGHIF PLKARPGGVL VRTGQTEGSV DLARLAGLKP AGVICEIMRD DGEMARMPDL
ERFSEEHGVA IVSIADIIAY RLQRERIVRC LTSGPMRPAF LGPGEPFQCA IYGAQVEDTE
YMALVRGDVA AAGAADEAVL VRVQSVSPVG DTFGVKPELA AALRTIDDAG VGVCLYVYNK
ARSSLEHDFR KHALREAIEP PAGGGAHSET LRDFGLGAQV LADLGCHKVR LLSNSSRRIA
GIEGFGIEVV ERVAIDIDGE GASPRPTLRS LPSSEPSSGE SATGGDET
|
|---|
| |